RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 DPP7Q9UHL4 492 aa23.3■■□□□ 1.32
UBFD1-210ENST00000571064 SSX2IPQ9Y2D8 614 aa23.3■■□□□ 1.32
UBFD1-210ENST00000571064 NUMBLQ9Y6R0 609 aa23.3■■□□□ 1.32
UBFD1-210ENST00000571064 EPG5Q9HCE0 2579 aa23.3■■□□□ 1.32
UBFD1-210ENST00000571064 ANHXE9PGG2 379 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 PTGESO14684 152 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 EXTL3O43909 919 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 NR3C1P04150 777 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 GLUD2P49448 558 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 WNT7BP56706 349 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 ANKRD40Q6AI12 368 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 KLHL10Q6JEL2 608 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 PALB2Q86YC2 1186 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 SLC9A9Q8IVB4 645 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 GPD1LQ8N335 351 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 SYAP1Q96A49 352 aaPredicted RBP23.29■■□□□ 1.32
UBFD1-210ENST00000571064 MED15Q96RN5 788 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 RPP25Q9BUL9 199 aaKnown RBP23.29■■□□□ 1.32
UBFD1-210ENST00000571064 RXFP1Q9HBX9 757 aa23.29■■□□□ 1.32
UBFD1-210ENST00000571064 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.29■■□□□ 1.32
UBFD1-210ENST00000571064 TPRP12270 2363 aaKnown RBP23.29■■□□□ 1.32
UBFD1-210ENST00000571064 PDCD11Q14690 1871 aaKnown RBP23.28■■□□□ 1.32
UBFD1-210ENST00000571064 F8W810 466 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 CALUO43852 315 aaPredicted RBP23.28■■□□□ 1.32
UBFD1-210ENST00000571064 ADRB2P07550 413 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 CCNE1P24864 410 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 OR1G1P47890 313 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 SCNN1GP51170 649 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 NFIL3Q16649 462 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 KYAT1Q16773 422 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 CBWD2Q8IUF1 395 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 RNF168Q8IYW5 571 aaPredicted RBP23.28■■□□□ 1.32
UBFD1-210ENST00000571064 MLKLQ8NB16 471 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 NELFBQ8WX92 580 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 ZMAT2Q96NC0 199 aaKnown RBP23.28■■□□□ 1.32
UBFD1-210ENST00000571064 CTNND2Q9UQB3 1225 aa23.28■■□□□ 1.32
UBFD1-210ENST00000571064 TDRD15B5MCY1 1934 aaKnown RBP23.27■■□□□ 1.32
UBFD1-210ENST00000571064 TTC26A0AVF1 554 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 LACTBL1A8MY62 500 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 PSMA7O14818 248 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 KIAA0391O15091 583 aaKnown RBP23.27■■□□□ 1.32
UBFD1-210ENST00000571064 EFEMP2O95967 443 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 PPP1R2P41236 205 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 CASP4P49662 377 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 STARD6P59095 220 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 STIM1Q13586 685 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 COLGALT2Q8IYK4 626 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 XXYLT1Q8NBI6 393 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 B3GALT6Q96L58 329 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 DUSP9Q99956 384 aaKnown RBP23.27■■□□□ 1.32
UBFD1-210ENST00000571064 RPF1Q9H9Y2 349 aaKnown RBP23.27■■□□□ 1.32
UBFD1-210ENST00000571064 NCDNQ9UBB6 729 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 COL4A3Q01955 1670 aa23.27■■□□□ 1.32
UBFD1-210ENST00000571064 PAPLNO95428 1278 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 LDHAP00338 332 aaKnown RBP23.26■■□□□ 1.31
UBFD1-210ENST00000571064 YARSP54577 528 aaKnown RBP23.26■■□□□ 1.31
UBFD1-210ENST00000571064 STX17P56962 302 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 GPC5P78333 572 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 MYBPC2Q14324 1141 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 NAB2Q15742 525 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 EDRF1Q3B7T1 1238 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 GLRA4Q5JXX5 417 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 VARS2Q5ST30 1063 aaKnown RBP23.26■■□□□ 1.31
UBFD1-210ENST00000571064 TTI2Q6NXR4 508 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 GLYCTKQ8IVS8 523 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 ZC3H3Q8IXZ2 948 aaKnown RBP23.26■■□□□ 1.31
UBFD1-210ENST00000571064 NOC3LQ8WTT2 800 aaKnown RBP23.26■■□□□ 1.31
UBFD1-210ENST00000571064 CNTN3Q9P232 1028 aa23.26■■□□□ 1.31
UBFD1-210ENST00000571064 SMIM28A0A1B0GU29 152 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 TGM5O43548 720 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 KCNE1P15382 129 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 NR2F2P24468 414 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 ATXN1P54253 815 aaKnown RBP23.25■■□□□ 1.31
UBFD1-210ENST00000571064 POU5F1Q01860 360 aaKnown RBP23.25■■□□□ 1.31
UBFD1-210ENST00000571064 DSG1Q02413 1049 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 SPAG1Q07617 926 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 PAK1Q13153 545 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 SASS6Q6UVJ0 657 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 BRSK2Q8IWQ3 736 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 TMEM130Q8N3G9 435 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 RDH13Q8NBN7 331 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 HDAC7Q8WUI4 952 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 PPP1R10Q96QC0 940 aaKnown RBP23.25■■□□□ 1.31
UBFD1-210ENST00000571064 PRKD2Q9BZL6 878 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 PLEKHA4Q9H4M7 779 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 PLEKHA5Q9HAU0 1116 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 TOPORSQ9NS56 1045 aaPredicted RBP23.25■■□□□ 1.31
UBFD1-210ENST00000571064 SPATA6Q9NWH7 488 aaPredicted RBP23.25■■□□□ 1.31
UBFD1-210ENST00000571064 SPTBN2O15020 2390 aa23.25■■□□□ 1.31
UBFD1-210ENST00000571064 KMT2BQ9UMN6 2715 aaPredicted RBP23.24■■□□□ 1.31
UBFD1-210ENST00000571064 EXOC3O60645 756 aa23.24■■□□□ 1.31
UBFD1-210ENST00000571064 LRRC63Q05C16 580 aa23.24■■□□□ 1.31
UBFD1-210ENST00000571064 SNRNP35Q16560 246 aaKnown RBP23.24■■□□□ 1.31
UBFD1-210ENST00000571064 PARM1Q6UWI2 310 aa23.24■■□□□ 1.31
UBFD1-210ENST00000571064 FGF14Q92915 247 aa23.24■■□□□ 1.31
UBFD1-210ENST00000571064 EEF2KMTQ96G04 330 aa23.24■■□□□ 1.31
UBFD1-210ENST00000571064 SHDQ96IW2 340 aa23.24■■□□□ 1.31
UBFD1-210ENST00000571064 TSG101Q99816 390 aa23.24■■□□□ 1.31
UBFD1-210ENST00000571064 FUCA2Q9BTY2 467 aa23.24■■□□□ 1.31
UBFD1-210ENST00000571064 GZF1Q9H116 711 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms