RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 STYXL1Q9Y6J8 313 aa13.4□□□□□ -0.26
CTDNEP1-205ENST00000570828 A0A087X0B3 334 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 OR6C75A6NL08 312 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 PPEF2O14830 753 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 PPP6R2O75170 966 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 OAZ2O95190 189 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 SEC24AO95486 1093 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 YEATS4O95619 227 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 PTPN2P17706 415 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 AOC1P19801 751 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 TYMPP19971 482 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 PAX3P23760 479 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 LILRA4P59901 499 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 POU5F1Q01860 360 aaKnown RBP13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 SLC5A9Q2M3M2 681 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 FOXD4L5Q5VV16 416 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 C9orf57Q5W0N0 161 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 OVOS1Q6IE37 1185 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 IQCEQ6IPM2 695 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 PARM1Q6UWI2 310 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 Q6ZNB5 142 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 PDZD4Q76G19 769 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 CCDC65Q8IXS2 484 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 SYCP3Q8IZU3 236 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 FOXD4L4Q8WXT5 416 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 RTP3Q9BQQ7 232 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 CORO1BQ9BR76 489 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 LRRC27Q9C0I9 530 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 IKZF4Q9H2S9 585 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 AVENQ9NQS1 362 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 ARHGEF3Q9NR81 526 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 PANK4Q9NVE7 773 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 KMT2EQ8IZD2 1858 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 MYH11P35749 1972 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 CITO14578 2027 aa13.39□□□□□ -0.27
CTDNEP1-205ENST00000570828 FRMD3A2A2Y4 597 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 KRBA1A5PL33 1030 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 ZNF197O14709 1029 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 IL18RAPO95256 599 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 NPR3P17342 541 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 CEBPBP17676 345 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 ADSSP30520 456 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 KCNA1Q09470 495 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 TWF1Q12792 350 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 RNF19BQ6ZMZ0 732 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 STXBP4Q6ZWJ1 553 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 SENP8Q96LD8 212 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 KXD1Q9BQD3 176 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 STRA6Q9BX79 667 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 TNMDQ9H2S6 317 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 CUEDC2Q9H467 287 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 TBC1D17Q9HA65 648 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 WDR70Q9NW82 654 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 GDE1Q9NZC3 331 aa13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
CTDNEP1-205ENST00000570828 MTCL1Q9Y4B5 1905 aaKnown RBP13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 MYO10Q9HD67 2058 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 ANO9A1A5B4 782 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 H0Y858 1186 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 CUTAO60888 179 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 OR4Q2P0C623 313 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 ZSCAN22P10073 491 aaPredicted RBP13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 CASP5P51878 434 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 PLD1Q13393 1074 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 MYBPC2Q14324 1141 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 FOXD4L6Q3SYB3 417 aaPredicted RBP13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 CYP4A22Q5TCH4 519 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 ARMCX5Q6P1M9 558 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 FOXD4L3Q6VB84 417 aaPredicted RBP13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 LEMD2Q8NC56 503 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 MCRS1Q96EZ8 462 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 ZNF512Q96ME7 567 aaPredicted RBP13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 PGLYRP2Q96PD5 576 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 FAM213AQ9BRX8 229 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 RPP25Q9BUL9 199 aaKnown RBP13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 ASAH2Q9NR71 780 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 DPP3Q9NY33 737 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 RABGEF1Q9UJ41 708 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 DSEQ9UL01 958 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 YIPF1Q9Y548 306 aa13.37□□□□□ -0.27
CTDNEP1-205ENST00000570828 TRIP11Q15643 1979 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 PIRO00625 290 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 SPTLC1O15269 473 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 PI15O43692 258 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 GARTP22102 1010 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 TAF6P49848 677 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 GPC5P78333 572 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 AMPD3Q01432 767 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 PFKPQ01813 784 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 GPR17Q13304 367 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 PRSS36Q5K4E3 855 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 CRELD2Q6UXH1 353 aaPredicted RBP13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 METTL23Q86XA0 190 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 NT5DC4Q86YG4 428 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 BRSK2Q8IWQ3 736 aa13.36□□□□□ -0.27
CTDNEP1-205ENST00000570828 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms