RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 PAK2Q13177 524 aa11.67□□□□□ -0.54
PDXDC1-216ENST00000569715 MBTPS1Q14703 1052 aa11.67□□□□□ -0.54
PDXDC1-216ENST00000569715 C9orf57Q5W0N0 161 aa11.67□□□□□ -0.54
PDXDC1-216ENST00000569715 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
PDXDC1-216ENST00000569715 BEST2Q8NFU1 509 aa11.67□□□□□ -0.54
PDXDC1-216ENST00000569715 ZNF653Q96CK0 615 aa11.67□□□□□ -0.54
PDXDC1-216ENST00000569715 ELOVL4Q9GZR5 314 aa11.67□□□□□ -0.54
PDXDC1-216ENST00000569715 PDCL3Q9H2J4 239 aa11.67□□□□□ -0.54
PDXDC1-216ENST00000569715 PHF24Q9UPV7 400 aa11.67□□□□□ -0.54
PDXDC1-216ENST00000569715 CKBP12277 381 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 KCNE1P15382 129 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 RAD23BP54727 409 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 NOMO3P69849 1222 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 GPC5P78333 572 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 MEI1Q5TIA1 1274 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 DEFB118Q96PH6 123 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 MMS19Q96T76 1030 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 SMARCAL1Q9NZC9 954 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 EHD2Q9NZN4 543 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 UBQLN1Q9UMX0 589 aaKnown RBP11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 GPR182O15218 404 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 CILPO75339 1184 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 IGFBP6P24592 240 aaPredicted RBP11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 MLH1P40692 756 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 OSBPL9Q96SU4 736 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 PAK6Q9NQU5 681 aaPredicted RBP11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 CTTNBP2NLQ9P2B4 639 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 A0A0U1RQG5 324 aaPredicted RBP11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 KBTBD13C9JR72 458 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 PDE2AO00408 941 aaPredicted RBP11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 STAU1O95793 577 aaKnown RBP11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 TNNC1P63316 161 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 CENPCQ03188 943 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 ERCC6LQ2NKX8 1250 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 FAM26DQ5JW98 314 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 DAAM2Q86T65 1068 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 SLC4A11Q8NBS3 891 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 GSTCDQ8NEC7 633 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 NME7Q9Y5B8 376 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 SNX9Q9Y5X1 595 aa11.66□□□□□ -0.54
PDXDC1-216ENST00000569715 SPTLC1O15269 473 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 RPLP2P05387 115 aaKnown RBP11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 ELF2Q15723 593 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 SLFN11Q7Z7L1 901 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 CPNE8Q86YQ8 564 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 MCOLN2Q8IZK6 566 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 BTBD6Q96KE9 485 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 GAD1Q99259 594 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 MRPL45Q9BRJ2 306 aaKnown RBP11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 CHST12Q9NRB3 414 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 ARVCFO00192 962 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 CYP1A2P05177 515 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 CD19P15391 556 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 ATF7P17544 494 aaPredicted RBP11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 MYO1EQ12965 1108 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 DSC3Q14574 896 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 WHAMMP3Q1A5X7 153 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 AGMOQ6ZNB7 445 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 MON1BQ7L1V2 547 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 C11orf70Q9BRQ4 267 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 NUP85Q9BW27 656 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 GTF3C4Q9UKN8 822 aa11.65□□□□□ -0.54
PDXDC1-216ENST00000569715 TLR3O15455 904 aaKnown RBP11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 NSFP46459 744 aaKnown RBP11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 YWHAEP62258 255 aaKnown RBP11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 IFI16Q16666 785 aaKnown RBP11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 CREG2Q8IUH2 290 aa11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 RNF169Q8NCN4 708 aa11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 C1orf131Q8NDD1 294 aaKnown RBP11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 PPP1R10Q96QC0 940 aaKnown RBP11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 EPC1Q9H2F5 836 aa11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 WBP1LQ9NX94 342 aa11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 MIOSQ9NXC5 875 aa11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 CNOT8Q9UFF9 292 aaKnown RBP11.65□□□□□ -0.55
PDXDC1-216ENST00000569715 PIRO00625 290 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 HCRTO43612 131 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 ITGA4P13612 1032 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 P4HA1P13674 534 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 ZSCAN20P17040 1043 aaPredicted RBP11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 RRM1P23921 792 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 NDST1P52848 882 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 MMS22LQ6ZRQ5 1243 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 NT5DC3Q86UY8 548 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 RHOT2Q8IXI1 618 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 ADAM2Q99965 735 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 TRIM7Q9C029 511 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 CYP3A43Q9HB55 503 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 STXBP5LQ9Y2K9 1186 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 DYNC1I1O14576 645 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 CCL5P13501 91 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 INCA1Q0VD86 236 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 DENND1BQ6P3S1 775 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 WDTC1Q8N5D0 677 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 LRRC52Q8N7C0 313 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 ZNF564Q8TBZ8 553 aaPredicted RBP11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 FAXDC2Q96IV6 333 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 MS4A14Q96JA4 679 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 RNF208Q9H0X6 261 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 TMEM110-MUSTN1A8MSY1 372 aa11.64□□□□□ -0.55
PDXDC1-216ENST00000569715 DNM1LO00429 736 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms