RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 ITIH3Q06033 890 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 PTK7Q13308 1070 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 KCNA10Q16322 511 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 XKR4Q5GH76 650 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 ZNF667Q5HYK9 610 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 JADE1Q6IE81 842 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 ACAD10Q6JQN1 1059 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 ALKAL1Q6UXT8 129 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 ZNF572Q7Z3I7 529 aaPredicted RBP10.02□□□□□ -0.81
CNOT1-214ENST00000568917 HACE1Q8IYU2 909 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 C1orf127Q8N9H9 656 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 USP38Q8NB14 1042 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 CXorf38Q8TB03 319 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 SNX27Q96L92 541 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 PPP1R16BQ96T49 567 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 USB1Q9BQ65 265 aaKnown RBP10.02□□□□□ -0.81
CNOT1-214ENST00000568917 TRAIPQ9BWF2 469 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 TRIM6Q9C030 488 aaPredicted RBP10.02□□□□□ -0.81
CNOT1-214ENST00000568917 ZNF518BQ9C0D4 1074 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 KDM4CQ9H3R0 1056 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 UVRAGQ9P2Y5 699 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 LCMT1Q9UIC8 334 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 SIX4Q9UIU6 781 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 SALL4Q9UJQ4 1053 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 TFR2Q9UP52 801 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 HYOU1Q9Y4L1 999 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 PCDHB4Q9Y5E5 795 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 GPR182O15218 404 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CSDE1O75534 798 aaKnown RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 PALMO75781 387 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 NPTXRO95502 500 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 LSM8O95777 96 aaKnown RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CD4P01730 458 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 FTLP02792 175 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CYP1A1P04798 512 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 ATP1A1P05023 1023 aaKnown RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 TUBBP07437 444 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 MMEP08473 750 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 PAEPP09466 180 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 UNGP13051 313 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 KCNE1P15382 129 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 ELNP15502 786 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CYP3A5P20815 502 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 YY1P25490 414 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 GNA15P30679 374 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 ASPAP45381 313 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CHMP4BP1P59074 171 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 OSTNP61366 133 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CAP1Q01518 475 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CENPCQ03188 943 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 MGAT3Q09327 533 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 MYO1EQ12965 1108 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 TRIM32Q13049 653 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 ZBTB6Q15916 424 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CLEC16AQ2KHT3 1053 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 FAM26DQ5JW98 314 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 MEI1Q5TIA1 1274 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 SPOPLQ6IQ16 392 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 GDF6Q6KF10 455 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CDR2LQ86X02 465 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 TMEM192Q8IY95 271 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 LRRC52Q8N7C0 313 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 LRRC57Q8N9N7 239 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 RBBP8NLQ8NC74 664 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 BEST2Q8NFU1 509 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 TPCN2Q8NHX9 752 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 SLC20A1Q8WUM9 679 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 TMEM40Q8WWA1 233 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 PACSIN1Q9BY11 444 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 SENP6Q9GZR1 1112 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 HMX1Q9NP08 348 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 AVENQ9NQS1 362 aaPredicted RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 SEPT11Q9NVA2 429 aaKnown RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 GTF3C4Q9UKN8 822 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 UBQLN1Q9UMX0 589 aaKnown RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 PIN4Q9Y237 131 aaKnown RBP10.01□□□□□ -0.81
CNOT1-214ENST00000568917 GINS2Q9Y248 185 aa10.01□□□□□ -0.81
CNOT1-214ENST00000568917 CTAGE15A4D2H0 777 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 GRID2IPA4D2P6 1211 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 MEFVO15553 781 aaPredicted RBP10□□□□□ -0.81
CNOT1-214ENST00000568917 MED7O43513 233 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 TADA3O75528 432 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 ITGB3P05106 788 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 CYP1A2P05177 515 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 FAM163BP0C2L3 166 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 CTAGE8P0CG41 777 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 ATF7P17544 494 aaPredicted RBP10□□□□□ -0.81
CNOT1-214ENST00000568917 GRK4P32298 578 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 CDH5P33151 784 aaPredicted RBP10□□□□□ -0.81
CNOT1-214ENST00000568917 PNPLA4P41247 253 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 NOP2P46087 812 aaKnown RBP10□□□□□ -0.81
CNOT1-214ENST00000568917 RAB27AP51159 221 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 ACLYP53396 1101 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 TMEM62Q0P6H9 643 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 ITGA7Q13683 1181 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 CLUL1Q15846 466 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 C11orf63Q6NUN7 778 aa10□□□□□ -0.81
CNOT1-214ENST00000568917 TMEM270Q6UE05 265 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms