RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 KCNH2Q12809 1159 aa17.9■□□□□ 0.46
CNEP1R1-210ENST00000568890 CDKAL1Q5VV42 579 aa17.9■□□□□ 0.46
CNEP1R1-210ENST00000568890 KRT39Q6A163 491 aa17.9■□□□□ 0.46
CNEP1R1-210ENST00000568890 PDE12Q6L8Q7 609 aaKnown RBP17.9■□□□□ 0.46
CNEP1R1-210ENST00000568890 FEZF2Q8TBJ5 459 aa17.9■□□□□ 0.46
CNEP1R1-210ENST00000568890 POLIQ9UNA4 740 aa17.9■□□□□ 0.46
CNEP1R1-210ENST00000568890 NME7Q9Y5B8 376 aa17.9■□□□□ 0.46
CNEP1R1-210ENST00000568890 ATG2AQ2TAZ0 1938 aa17.89■□□□□ 0.46
CNEP1R1-210ENST00000568890 CLASP2O75122 1294 aaKnown RBP17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 CYP11A1P05108 521 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 PNPLA4P41247 253 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 FMO5P49326 533 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 TRPC3Q13507 836 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 IQCB1Q15051 598 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 TPD52L1Q16890 204 aaPredicted RBP17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 USP37Q86T82 979 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 PDCL2Q8N4E4 241 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 LMO3Q8TAP4 145 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 TLE6Q9H808 572 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 COQ4Q9Y3A0 265 aa17.89■□□□□ 0.45
CNEP1R1-210ENST00000568890 FGFR1OPO95684 399 aaKnown RBP17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 ASS1P00966 412 aaKnown RBP17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 ZNF165P49910 485 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 DLX2Q07687 328 aaPredicted RBP17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 PSMD5Q16401 504 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 SV2CQ496J9 727 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 MIIPQ5JXC2 388 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 AOPEPQ8N6M6 819 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 TMEM209Q96SK2 561 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 VRTNQ9H8Y1 702 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 MTRRQ9UBK8 725 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 NXF1Q9UBU9 619 aaKnown RBP17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 STK39Q9UEW8 545 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 STXBP5LQ9Y2K9 1186 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 GLP2RO95838 553 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 OR1D2P34982 312 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 LTBRP36941 435 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 MXI1P50539 228 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 CDH8P55286 799 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 MYL5Q02045 173 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 MYO1EQ12965 1108 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 DUSP6Q16828 381 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 OSTM1Q86WC4 334 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 PALB2Q86YC2 1186 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 GPR65Q8IYL9 337 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 KBTBD7Q8WVZ9 684 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 TATDN2Q93075 761 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 ZNF560Q96MR9 790 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 PRDM6Q9NQX0 595 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 RAB20Q9NX57 234 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 FBXL5Q9UKA1 691 aa17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.88■□□□□ 0.45
CNEP1R1-210ENST00000568890 STAU1O95793 577 aaKnown RBP17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 SPATA31D3P0C874 917 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 ZNF18P17022 549 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 TYMPP19971 482 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 LMO2P25791 158 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 YWHAHQ04917 246 aaPredicted RBP17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 COL19A1Q14993 1142 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 CTC1Q2NKJ3 1217 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 SGSM1Q2NKQ1 1148 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 TCP11X2Q5H9J9 407 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 LILRA6Q6PI73 481 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 SPATA31D4Q6ZUB0 917 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 FBXL13Q8NEE6 735 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 OR10T2Q8NGX3 314 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 BPIFA3Q9BQP9 254 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 SDCBP2Q9H190 292 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 FNIP2Q9P278 1114 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 CDY1Q9Y6F8 540 aa17.87■□□□□ 0.45
CNEP1R1-210ENST00000568890 KCNJ18B7U540 433 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 OR4Q2P0C623 313 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 ATP1A3P13637 1013 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 ATICP31939 592 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 CLCN4P51793 760 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 ADAM15Q13444 863 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 KCNJ12Q14500 433 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 OVOS1Q6IE37 1185 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 SLC8B1Q6J4K2 584 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 ANKS3Q6ZW76 656 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 LRRTM3Q86VH5 581 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 APPL2Q8NEU8 664 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 MAFAQ8NHW3 353 aaPredicted RBP17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 SLC22A17Q8WUG5 538 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 MMS19Q96T76 1030 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 MRPL45Q9BRJ2 306 aaKnown RBP17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 TUBGCP2Q9BSJ2 902 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 BACE2Q9Y5Z0 518 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 HCFC2Q9Y5Z7 792 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 GABRDO14764 452 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 PMM2O15305 246 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 EPCAMP16422 314 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 PAX3P23760 479 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 KLRC2P26717 231 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 PIK3CAP42336 1068 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 CCDC142Q17RM4 750 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 ZNF699Q32M78 642 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 CTXN3Q4LDR2 81 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 LLGL2Q6P1M3 1020 aa17.86■□□□□ 0.45
CNEP1R1-210ENST00000568890 APTXQ7Z2E3 356 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms