RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 TBC1D17Q9HA65 648 aa13.96□□□□□ -0.17
TSC2-220ENST00000568238 AVENQ9NQS1 362 aaPredicted RBP13.96□□□□□ -0.17
TSC2-220ENST00000568238 GDE1Q9NZC3 331 aa13.96□□□□□ -0.17
TSC2-220ENST00000568238 AFF4Q9UHB7 1163 aaKnown RBP13.96□□□□□ -0.17
TSC2-220ENST00000568238 USP25Q9UHP3 1055 aa13.96□□□□□ -0.17
TSC2-220ENST00000568238 AGO2Q9UKV8 859 aaKnown RBP13.96□□□□□ -0.17
TSC2-220ENST00000568238 MAFFQ9ULX9 164 aa13.96□□□□□ -0.17
TSC2-220ENST00000568238 DERAQ9Y315 318 aa13.96□□□□□ -0.17
TSC2-220ENST00000568238 RIF1Q5UIP0 2472 aaKnown RBP13.95□□□□□ -0.18
TSC2-220ENST00000568238 TISP43B9A030 160 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 ANKRD63C9JTQ0 380 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 PPP1R37O75864 691 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 OAZ2O95190 189 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 ODC1P11926 461 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 CEBPBP17676 345 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 PTPN2P17706 415 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 ACOT2P49753 483 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 SNW1Q13573 536 aaKnown RBP13.95□□□□□ -0.18
TSC2-220ENST00000568238 CUL4BQ13620 913 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 ZNF720Q7Z2F6 126 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 ENGASEQ8NFI3 743 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 POMGNT1Q8WZA1 660 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 DNAJC19Q96DA6 116 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 KXD1Q9BQD3 176 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 TRIM9Q9C026 710 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 C2CD2Q9Y426 696 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 TIMM13Q9Y5L4 95 aaPredicted RBP13.95□□□□□ -0.18
TSC2-220ENST00000568238 STYXL1Q9Y6J8 313 aa13.95□□□□□ -0.18
TSC2-220ENST00000568238 OR6C75A6NL08 312 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 GOLGA6L22H0YM25 854 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 PPEF2O14830 753 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 GCNT3O95395 438 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 PRR29P0C7W0 189 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 TYMPP19971 482 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 PAX3P23760 479 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 LILRA4P59901 499 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 GPC5P78333 572 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 TWF1Q12792 350 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 PRSS36Q5K4E3 855 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 C9orf57Q5W0N0 161 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 OVOS1Q6IE37 1185 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 IQCEQ6IPM2 695 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 PHLDB3Q6NSJ2 640 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 RNF19BQ6ZMZ0 732 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 PDZD4Q76G19 769 aaPredicted RBP13.94□□□□□ -0.18
TSC2-220ENST00000568238 DTWD2Q8NBA8 298 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 C7orf25Q9BPX7 421 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 IKZF4Q9H2S9 585 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 ASB7Q9H672 318 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 OLFML3Q9NRN5 406 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 PANK4Q9NVE7 773 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 TBC1D7Q9P0N9 293 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 EXOC7Q9UPT5 735 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 YIPF1Q9Y548 306 aa13.94□□□□□ -0.18
TSC2-220ENST00000568238 ZNF292O60281 2723 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 FAM186AA6NE01 2351 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 ZNF197O14709 1029 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 KINO60870 393 aaKnown RBP13.93□□□□□ -0.18
TSC2-220ENST00000568238 ECI2O75521 394 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 OR4Q2P0C623 313 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 ADSSP30520 456 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 PFKPQ01813 784 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 POU5F1Q01860 360 aaKnown RBP13.93□□□□□ -0.18
TSC2-220ENST00000568238 PLD1Q13393 1074 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 POSTNQ15063 836 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 L1TD1Q5T7N2 865 aaKnown RBP13.93□□□□□ -0.18
TSC2-220ENST00000568238 CYP4A22Q5TCH4 519 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 CCDC65Q8IXS2 484 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 LEMD2Q8NC56 503 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 TCEAL4Q96EI5 215 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 MCRS1Q96EZ8 462 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 SHDQ96IW2 340 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 SENP8Q96LD8 212 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 ZNF512Q96ME7 567 aaPredicted RBP13.93□□□□□ -0.18
TSC2-220ENST00000568238 PGLYRP2Q96PD5 576 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 ACCSQ96QU6 501 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 STRA6Q9BX79 667 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 ASAH2Q9NR71 780 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 LMBRD1Q9NUN5 540 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 COL4A3Q01955 1670 aa13.93□□□□□ -0.18
TSC2-220ENST00000568238 PATJQ8NI35 1801 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 ANO9A1A5B4 782 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 FRMD3A2A2Y4 597 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 PIRO00625 290 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 SPTLC1O15269 473 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 GFRA3O60609 400 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 MICAL2O94851 1124 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 IL18RAPO95256 599 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 VNN2O95498 520 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 NBL1P41271 181 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 CASP5P51878 434 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 KCNA1Q09470 495 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 ALCAMQ13740 583 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 MYBPC2Q14324 1141 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 ANGPT1Q15389 498 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 MLF2Q15773 248 aaPredicted RBP13.92□□□□□ -0.18
TSC2-220ENST00000568238 CNNM4Q6P4Q7 775 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 PJA1Q8NG27 643 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 HPS3Q969F9 1004 aa13.92□□□□□ -0.18
TSC2-220ENST00000568238 FOXQ1Q9C009 403 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms