RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 OVOS1Q6IE37 1185 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 SLC8B1Q6J4K2 584 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 LRRC52Q8N7C0 313 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 GPT2Q8TD30 523 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 TMC2Q8TDI7 906 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 ADAMTS19Q8TE59 1207 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 SUSD6Q92537 303 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 ELMO3Q96BJ8 720 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 DHTKD1Q96HY7 919 aaPredicted RBP14.01□□□□□ -0.17
CNOT1-213ENST00000568158 HPDLQ96IR7 371 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 TMEM209Q96SK2 561 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 COL25A1Q9BXS0 654 aaPredicted RBP14.01□□□□□ -0.17
CNOT1-213ENST00000568158 GTPBP4Q9BZE4 634 aaKnown RBP14.01□□□□□ -0.17
CNOT1-213ENST00000568158 CLSTN2Q9H4D0 955 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 PLEKHA4Q9H4M7 779 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 R3HCC1Q9Y3T6 440 aaKnown RBP14.01□□□□□ -0.17
CNOT1-213ENST00000568158 XIRP2A4UGR9 3374 aa14.01□□□□□ -0.17
CNOT1-213ENST00000568158 WDR27A2RRH5 827 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 CETN3O15182 167 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 PHACTR2O75167 634 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 ABLIM3O94929 683 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 C1RP00736 705 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 CYP11A1P05108 521 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 ODC1P11926 461 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 PNPLA4P41247 253 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 VAMP7P51809 220 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 CDR1P51861 262 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 STX17P56962 302 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 CLDN10P78369 228 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 ROR1Q01973 937 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 ITIH3Q06033 890 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 STIM1Q13586 685 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 ZNF280DQ6N043 979 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 CES5AQ6NT32 575 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 GPR149Q86SP6 731 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 METTL23Q86XA0 190 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 FAM186BQ8IYM0 893 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 ZNF461Q8TAF7 563 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 HDAC7Q8WUI4 952 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 ZNF560Q96MR9 790 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 TSG101Q99816 390 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 DUSP9Q99956 384 aaKnown RBP14□□□□□ -0.17
CNOT1-213ENST00000568158 RTP3Q9BQQ7 232 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 FBXW11Q9UKB1 542 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 SNX9Q9Y5X1 595 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 DOCK6Q96HP0 2047 aa14□□□□□ -0.17
CNOT1-213ENST00000568158 PSMA7O14818 248 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 MAPK13O15264 365 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 ZMYND10O75800 440 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 SEC24AO95486 1093 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 VNN1O95497 513 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 TRIM49P0CI25 452 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 TRIM49CP0CI26 452 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 MYL6P60660 151 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 FKBP3Q00688 224 aaKnown RBP13.99□□□□□ -0.17
CNOT1-213ENST00000568158 BIRC3Q13489 604 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 TRPC3Q13507 836 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 ATAT1Q5SQI0 421 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 TDRD10Q5VZ19 366 aaKnown RBP13.99□□□□□ -0.17
CNOT1-213ENST00000568158 RNF19BQ6ZMZ0 732 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
CNOT1-213ENST00000568158 NELFBQ8WX92 580 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 UHRF1Q96T88 793 aaPredicted RBP13.99□□□□□ -0.17
CNOT1-213ENST00000568158 SFXN1Q9H9B4 322 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 CD320Q9NPF0 282 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 GDAP2Q9NXN4 497 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 DPP7Q9UHL4 492 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 L1RE1Q9UN81 338 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 FAM50BQ9Y247 325 aa13.99□□□□□ -0.17
CNOT1-213ENST00000568158 ARHGEF37A1IGU5 675 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 OR6C75A6NL08 312 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 GOLGA6L22H0YM25 854 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 IKBKBO14920 756 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 HUS1O60921 280 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 C8AP07357 584 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 KRT13P13646 458 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 CPB1P15086 417 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 ATF2P15336 505 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 ELF1P32519 619 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 AP3M2P53677 418 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 PPP3CAQ08209 521 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 ADCY1Q08828 1119 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 MYO1EQ12965 1108 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 CBX2Q14781 532 aaPredicted RBP13.98□□□□□ -0.17
CNOT1-213ENST00000568158 SOWAHAQ2M3V2 549 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 PPM1LQ5SGD2 360 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 SV2AQ7L0J3 742 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 LRRTM3Q86VH5 581 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 OSTM1Q86WC4 334 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 ZC3H3Q8IXZ2 948 aaKnown RBP13.98□□□□□ -0.17
CNOT1-213ENST00000568158 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 PDCL2Q8N4E4 241 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 TRIML1Q8N9V2 468 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 OR10T2Q8NGX3 314 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 ZNF707Q96C28 371 aaPredicted RBP13.98□□□□□ -0.17
CNOT1-213ENST00000568158 PGLYRP2Q96PD5 576 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 PRKD2Q9BZL6 878 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 NUP62CLQ9H1M0 184 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 POMKQ9H5K3 350 aa13.98□□□□□ -0.17
CNOT1-213ENST00000568158 MMRN2Q9H8L6 949 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms