RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 LY6KQ17RY6 165 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 EDRF1Q3B7T1 1238 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 XKR3Q5GH77 459 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 ODR4Q5SWX8 454 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 CELF3Q5SZQ8 465 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 SFRP5Q5T4F7 317 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 FAM160B1Q5W0V3 765 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 MAEAQ7L5Y9 396 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 EPM2AIP1Q7L775 607 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 EEPD1Q7L9B9 569 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 TRMT1LQ7Z2T5 733 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 PLEKHH3Q7Z736 793 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 SAPCD2Q86UD0 394 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 FAM178BQ8IXR5 827 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 DHX37Q8IY37 1157 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 PLD6Q8N2A8 252 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 SLC43A3Q8NBI5 491 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 CCDC150Q8NCX0 1101 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 CACTINQ8WUQ7 758 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 CEP170P1Q96L14 293 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 DRC1Q96MC2 740 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 SLC9A7Q96T83 725 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 TUBGCP2Q9BSJ2 902 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 KCTD10Q9H3F6 313 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 ZNF302Q9NR11 478 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 OLFML3Q9NRN5 406 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 TAB2Q9NYJ8 693 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 LARSQ9P2J5 1176 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 PLAGL2Q9UPG8 496 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 TRAF3IP3Q9Y228 551 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 DIS3Q9Y2L1 958 aaKnown RBP6.73□□□□□ -1.33
CAPN3-218ENST00000568153 ASTN1O14525 1302 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 DOCK1Q14185 1865 aa6.73□□□□□ -1.33
CAPN3-218ENST00000568153 SCN4AP35499 1836 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 POLR2AP24928 1970 aaKnown RBP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 IGKV6D-21A0A0A0MT36 114 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 A0A1W2PQC6 194 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 GSTTP1A0A1W2PQM5 241 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 AKR1B15C9JRZ8 316 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 EIF3DO15371 548 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 GGPS1O95749 300 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 CEACAM5P06731 702 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 ZNF865P0CJ78 1059 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 MYBP10242 640 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 TXNP10599 105 aaKnown RBP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 ITIH2P19823 946 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 SFPQP23246 707 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 ADORA2AP29274 412 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 NMT1P30419 496 aaKnown RBP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 PBX1P40424 430 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 NPEPPSP55786 919 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 ARID5AQ03989 594 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 ALCAMQ13740 583 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 NOLC1Q14978 699 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 UGCGQ16739 394 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 BMT2Q1RMZ1 405 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 FAM110CQ1W6H9 321 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 CCDC40Q4G0X9 1142 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 VWA3BQ502W6 1294 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 FKBP15Q5T1M5 1219 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 FAM102BQ5T8I3 360 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 UTP14CQ5TAP6 766 aaKnown RBP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 METTL7BQ6UX53 244 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 C22orf34Q6ZV56 151 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 ANO5Q75V66 913 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 GPR142Q7Z601 462 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 RASAL3Q86YV0 1011 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 WFDC3Q8IUB2 231 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 EXOC8Q8IYI6 725 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 SYCP3Q8IZU3 236 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 KIAA1524Q8TCG1 905 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 SCFD2Q8WU76 684 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 CPLX3Q8WVH0 158 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 KIFAP3Q92845 792 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 EEF2KMTQ96G04 330 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 CNOT6LQ96LI5 555 aaKnown RBP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 KREMEN1Q96MU8 473 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 ACCSQ96QU6 501 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 TM9SF2Q99805 663 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 NTPCRQ9BSD7 190 aaKnown RBP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 NUP58Q9BVL2 599 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 AZI2Q9H6S1 392 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 C17orf75Q9HAS0 396 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 CYP26B1Q9NR63 512 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 TYW1Q9NV66 732 aaKnown RBP6.72□□□□□ -1.33
CAPN3-218ENST00000568153 INTS13Q9NVM9 706 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 CPA4Q9UI42 421 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 STRIP2Q9ULQ0 834 aa6.72□□□□□ -1.33
CAPN3-218ENST00000568153 FAM86C2PA6NEL3 165 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 CCDC169A6NNP5 214 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 LGALS16A8MUM7 142 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 NOP56O00567 594 aaKnown RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 USO1O60763 962 aaKnown RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 FARP2O94887 1054 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 CBX7O95931 251 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 UBA1P22314 1058 aaKnown RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 ABCD1P33897 745 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 HOXD13P35453 343 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 TM4SF4P48230 202 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 CASP5P51878 434 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms