RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 N4BP1O75113 896 aaKnown RBP19.33■□□□□ 0.68
COMMD4-222ENST00000568034 URODP06132 367 aa19.33■□□□□ 0.68
COMMD4-222ENST00000568034 TYMPP19971 482 aa19.33■□□□□ 0.68
COMMD4-222ENST00000568034 MYO1EQ12965 1108 aa19.33■□□□□ 0.68
COMMD4-222ENST00000568034 VWA3BQ502W6 1294 aa19.33■□□□□ 0.68
COMMD4-222ENST00000568034 VARS2Q5ST30 1063 aaKnown RBP19.33■□□□□ 0.68
COMMD4-222ENST00000568034 PRSS55Q6UWB4 352 aaPredicted RBP19.33■□□□□ 0.68
COMMD4-222ENST00000568034 CEP57Q86XR8 500 aa19.33■□□□□ 0.68
COMMD4-222ENST00000568034 PDCL2Q8N4E4 241 aa19.33■□□□□ 0.68
COMMD4-222ENST00000568034 RIN2Q8WYP3 895 aaPredicted RBP19.33■□□□□ 0.68
COMMD4-222ENST00000568034 NGRNQ9NPE2 291 aaKnown RBP19.33■□□□□ 0.68
COMMD4-222ENST00000568034 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.33■□□□□ 0.68
COMMD4-222ENST00000568034 POLIQ9UNA4 740 aa19.33■□□□□ 0.68
COMMD4-222ENST00000568034 SNX9Q9Y5X1 595 aa19.33■□□□□ 0.68
COMMD4-222ENST00000568034 BECN2A8MW95 431 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 TBC1D4O60343 1298 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 ODC1P11926 461 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 NOP14P78316 857 aaKnown RBP19.32■□□□□ 0.68
COMMD4-222ENST00000568034 SMC1AQ14683 1233 aaKnown RBP19.32■□□□□ 0.68
COMMD4-222ENST00000568034 PTPROQ16827 1216 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 SOWAHAQ2M3V2 549 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 SGSM1Q2NKQ1 1148 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 WSCD1Q658N2 575 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 PDE12Q6L8Q7 609 aaKnown RBP19.32■□□□□ 0.68
COMMD4-222ENST00000568034 RSPO2Q6UXX9 243 aaPredicted RBP19.32■□□□□ 0.68
COMMD4-222ENST00000568034 ADGRD2Q7Z7M1 963 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 MRPL43Q8N983 215 aaKnown RBP19.32■□□□□ 0.68
COMMD4-222ENST00000568034 TAF4BQ92750 862 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 RTP3Q9BQQ7 232 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 NDST4Q9H3R1 872 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 RXFP1Q9HBX9 757 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 MTRRQ9UBK8 725 aa19.32■□□□□ 0.68
COMMD4-222ENST00000568034 R3HCC1Q9Y3T6 440 aaKnown RBP19.32■□□□□ 0.68
COMMD4-222ENST00000568034 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.31■□□□□ 0.68
COMMD4-222ENST00000568034 LRRC10BA6NIK2 292 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 C2CD2LO14523 706 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 CXCL14O95715 111 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 PRKCSHP14314 528 aaPredicted RBP19.31■□□□□ 0.68
COMMD4-222ENST00000568034 ASPAP45381 313 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 COPB1P53618 953 aaKnown RBP19.31■□□□□ 0.68
COMMD4-222ENST00000568034 WDR72Q3MJ13 1102 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 OSTM1Q86WC4 334 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 TOP6BLQ8N6T0 577 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 APPL2Q8NEU8 664 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 KBTBD7Q8WVZ9 684 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 GAS2L1Q99501 681 aaPredicted RBP19.31■□□□□ 0.68
COMMD4-222ENST00000568034 SDCBP2Q9H190 292 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 SMYD3Q9H7B4 428 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 MRPL17Q9NRX2 175 aaKnown RBP19.31■□□□□ 0.68
COMMD4-222ENST00000568034 NME7Q9Y5B8 376 aa19.31■□□□□ 0.68
COMMD4-222ENST00000568034 ADAM12O43184 909 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 OAZ2O95190 189 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 PSMD5Q16401 504 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 ZNF667Q5HYK9 610 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 KIAA1841Q6NSI8 718 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 ANKS3Q6ZW76 656 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 DPH6Q7L8W6 267 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 MICAL1Q8TDZ2 1067 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 KLHL5Q96PQ7 755 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 CLSTN3Q9BQT9 956 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 VPS16Q9H269 839 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 NSUN3Q9H649 340 aaKnown RBP19.3■□□□□ 0.68
COMMD4-222ENST00000568034 NXF1Q9UBU9 619 aaKnown RBP19.3■□□□□ 0.68
COMMD4-222ENST00000568034 BACE2Q9Y5Z0 518 aa19.3■□□□□ 0.68
COMMD4-222ENST00000568034 ARHGEF37A1IGU5 675 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 GTPBP10A4D1E9 387 aaKnown RBP19.29■□□□□ 0.68
COMMD4-222ENST00000568034 GABRDO14764 452 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 TEX28O15482 410 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 TACC1O75410 805 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 CNPP09543 421 aaKnown RBP19.29■□□□□ 0.68
COMMD4-222ENST00000568034 RPL17P18621 184 aaKnown RBP19.29■□□□□ 0.68
COMMD4-222ENST00000568034 IGFBP4P22692 258 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 RAP1GAPP47736 663 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 TNNC1P63316 161 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 YWHAHQ04917 246 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-222ENST00000568034 TCEAL5Q5H9L2 206 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 DPY19L2P1Q6NXN4 242 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 SCARA5Q6ZMJ2 495 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 GAS2L3Q86XJ1 694 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 ADGRF2Q8IZF7 708 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 EHBP1Q8NDI1 1231 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 OR10T2Q8NGX3 314 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 SPATA18Q8TC71 538 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 TATDN2Q93075 761 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 MRPL45Q9BRJ2 306 aaKnown RBP19.29■□□□□ 0.68
COMMD4-222ENST00000568034 CRACR2AQ9BSW2 395 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 BCO2Q9BYV7 579 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 NIF3L1Q9GZT8 377 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 INTS2Q9H0H0 1204 aaKnown RBP19.29■□□□□ 0.68
COMMD4-222ENST00000568034 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.29■□□□□ 0.68
COMMD4-222ENST00000568034 GCNT4Q9P109 453 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 FNIP2Q9P278 1114 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 DSEQ9UL01 958 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 SSX2IPQ9Y2D8 614 aa19.29■□□□□ 0.68
COMMD4-222ENST00000568034 LGALS16A8MUM7 142 aa19.28■□□□□ 0.68
COMMD4-222ENST00000568034 HCRTO43612 131 aa19.28■□□□□ 0.68
COMMD4-222ENST00000568034 HUS1O60921 280 aa19.28■□□□□ 0.68
COMMD4-222ENST00000568034 CDK11BP21127 795 aaKnown RBP19.28■□□□□ 0.68
COMMD4-222ENST00000568034 WARSP23381 471 aaKnown RBP19.28■□□□□ 0.68
COMMD4-222ENST00000568034 OVOS1Q6IE37 1185 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms