RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 CDH8P55286 799 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 SPA17Q15506 151 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 ZNF394Q53GI3 561 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 TAF3Q5VWG9 929 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 ZNF598Q86UK7 904 aaKnown RBP11.17□□□□□ -0.62
TCF4-236ENST00000567880 VPS36Q86VN1 386 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 SLC20A1Q8WUM9 679 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 APBB2Q92870 758 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 EIF3CQ99613 913 aaKnown RBP11.17□□□□□ -0.62
TCF4-236ENST00000567880 SMYD3Q9H7B4 428 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 CISHQ9NSE2 258 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 TFR2Q9UP52 801 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 REXO2Q9Y3B8 237 aaKnown RBP11.17□□□□□ -0.62
TCF4-236ENST00000567880 A0A087X0T9 212 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 CASTOR2A6NHX0 329 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 ENPP3O14638 875 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 ZNF263O14978 683 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 ABCB7O75027 752 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 PARNO95453 639 aaKnown RBP11.17□□□□□ -0.62
TCF4-236ENST00000567880 FAM228BP0C875 321 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 P4HA1P13674 534 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 SLC18A3Q16572 532 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 ASTE1Q2TB18 679 aaPredicted RBP11.17□□□□□ -0.62
TCF4-236ENST00000567880 KIAA1328Q86T90 577 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 GLYCTKQ8IVS8 523 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 RBBP8NLQ8NC74 664 aaPredicted RBP11.17□□□□□ -0.62
TCF4-236ENST00000567880 EPS8L1Q8TE68 723 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 RABGGTAQ92696 567 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 JAKMIP2Q96AA8 810 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 UBN1Q9NPG3 1134 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 LZTFL1Q9NQ48 299 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 SNX9Q9Y5X1 595 aa11.17□□□□□ -0.62
TCF4-236ENST00000567880 ANO9A1A5B4 782 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 TRIM43BA6NCK2 446 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 PIRO00625 290 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 CCP110O43303 1012 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 EOMESO95936 686 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 CXCL10P02778 98 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 CYP11B1P15538 503 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 RAG1P15918 1043 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 CYP3A5P20815 502 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 TNFAIP3P21580 790 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 ITGB8P26012 769 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 KRT83P78385 493 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 GLB1LQ6UWU2 654 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 NOP9Q86U38 636 aaKnown RBP11.16□□□□□ -0.62
TCF4-236ENST00000567880 RPUSD2Q8IZ73 545 aaKnown RBP11.16□□□□□ -0.62
TCF4-236ENST00000567880 LRRC52Q8N7C0 313 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 TRIM43Q96BQ3 446 aaPredicted RBP11.16□□□□□ -0.62
TCF4-236ENST00000567880 C16orf45Q96MC5 204 aaPredicted RBP11.16□□□□□ -0.62
TCF4-236ENST00000567880 ZNF560Q96MR9 790 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 AGPAT1Q99943 283 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 BCO2Q9BYV7 579 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 SDCBP2Q9H190 292 aa11.16□□□□□ -0.62
TCF4-236ENST00000567880 PUF60Q9UHX1 559 aaKnown RBP11.16□□□□□ -0.62
TCF4-236ENST00000567880 DDX3XO00571 662 aaKnown RBP eCLIP11.15□□□□□ -0.62
TCF4-236ENST00000567880 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.62
TCF4-236ENST00000567880 MMEP08473 750 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 CAPN2P17655 700 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 TAF6P49848 677 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 CLCNKBP51801 687 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 YWHAEP62258 255 aaKnown RBP11.15□□□□□ -0.62
TCF4-236ENST00000567880 ORC1Q13415 861 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 BMS1Q14692 1282 aaKnown RBP11.15□□□□□ -0.62
TCF4-236ENST00000567880 NAB2Q15742 525 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 CLLU1OSQ5K130 101 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 DNAAF5Q86Y56 855 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 REXO1L1PQ8IX06 675 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 UBR7Q8N806 425 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 LNX1Q8TBB1 728 aaPredicted RBP11.15□□□□□ -0.62
TCF4-236ENST00000567880 TMEM161AQ9NX61 479 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 NOCTQ9UK39 431 aaKnown RBP11.15□□□□□ -0.62
TCF4-236ENST00000567880 LRFN2Q9ULH4 789 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 PCDHB7Q9Y5E2 793 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 PCDHA13Q9Y5I0 950 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 LTBP2Q14767 1821 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 UQCRHLA0A096LP55 91 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
TCF4-236ENST00000567880 TMCO5BA8MYB1 307 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 KPNA7A9QM74 516 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 PODXLO00592 558 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 SPTLC1O15269 473 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 LCA5LO95447 670 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 TIMP1P01033 207 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 UQCRHP07919 91 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 CSF2RAP15509 400 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 LRPAP1P30533 357 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 GNA15P30679 374 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 SSTR3P32745 418 aaPredicted RBP11.15□□□□□ -0.62
TCF4-236ENST00000567880 PNPLA4P41247 253 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 FAM189BP81408 668 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 RNASELQ05823 741 aaKnown RBP11.15□□□□□ -0.62
TCF4-236ENST00000567880 GRIK3Q13003 919 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 SV2CQ496J9 727 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 ARHGAP29Q52LW3 1261 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 CCDC122Q5T0U0 273 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 ABI1Q8IZP0 508 aa11.15□□□□□ -0.62
TCF4-236ENST00000567880 MICAL1Q8TDZ2 1067 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms