RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CCND2P30279 289 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 ROR2Q01974 943 aaKnown RBP12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 COL9A3Q14050 684 aaPredicted RBP12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 PDIA6Q15084 440 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 EPHA7Q15375 998 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 C2CD6Q53TS8 623 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 CLEC4GQ6UXB4 293 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 LRRC6Q86X45 466 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 DDIASQ8IXT1 998 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 PPIL6Q8IXY8 311 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 TTC8Q8TAM2 541 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 CATSPER2Q96P56 530 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 BTBD10Q9BSF8 475 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 MKNK1Q9BUB5 465 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 SATB2Q9UPW6 733 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 FKBP6O75344 327 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 PAMP19021 973 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 DRD4P21917 467 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 TAP1Q03518 808 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 SMTNL2Q2TAL5 461 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 EEPD1Q7L9B9 569 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 SPATA18Q8TC71 538 aa12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
CSPG4P13-202ENST00000567704 GOLGA8CPA6NN73 597 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 M0R3G1 203 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 APOL1O14791 398 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 PJA2O43164 708 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 SLC37A4O43826 429 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 PSMC3P17980 439 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 CYP11B2P19099 503 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 NFX1Q12986 1120 aaKnown RBP12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 SNRNP35Q16560 246 aaKnown RBP12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 RWDD4Q6NW29 188 aaKnown RBP12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 WDR59Q6PJI9 974 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 GPR141Q7Z602 305 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 NCAPG2Q86XI2 1143 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 TMEM139Q8IV31 216 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 PGBD4Q96DM1 585 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 PRPF18Q99633 342 aaKnown RBP12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 APPL1Q9UKG1 709 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 PNMA3Q9UL41 463 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 SLIT1O75093 1534 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 SRRM3A6NNA2 597 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 SPAG6O75602 509 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 BGNP21810 368 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 EFHC1Q5JVL4 640 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 KIAA0895Q8NCT3 520 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 INPP5DQ92835 1189 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 TUFT1Q9NNX1 390 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 AGO2Q9UKV8 859 aaKnown RBP12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 ANGPT2O15123 496 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 SHBGP04278 402 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 POLD1P28340 1107 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 GSTT1P30711 240 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 SERPINB1P30740 379 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 CAPRIN1Q14444 709 aaKnown RBP12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 TBCCQ15814 346 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 FAM160B2Q86V87 743 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 CLEC4FQ8N1N0 589 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 FAM71DQ8N9W8 422 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 C1orf131Q8NDD1 294 aaKnown RBP12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 KAT2BQ92831 832 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 TBC1D22BQ9NU19 505 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 TAGLN3Q9UI15 199 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 PCDHB2Q9Y5E7 798 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 MROH2AA6NES4 1674 aa12.98□□□□□ -0.33
CSPG4P13-202ENST00000567704 A0A0A6YYK5 440 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 C16orf96A6NNT2 1141 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 SGPL1O95470 568 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 CSF1RP07333 972 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 MLH1P40692 756 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 PEX5P50542 639 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 PPIDQ08752 370 aaKnown RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 KCTD21Q4G0X4 260 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 ISLR2Q6UXK2 745 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 AGAP3Q96P47 875 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 AS3MTQ9HBK9 375 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 CORO1CQ9ULV4 474 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 CCDC78A2IDD5 438 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 BBOX1O75936 387 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 PECAM1P16284 738 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 HSPA13P48723 471 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 NSUN2Q08J23 767 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 GRAPQ13588 217 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 QPCTQ16769 361 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 MREGQ8N565 214 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 FBXO36Q8NEA4 188 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 GRAPLQ8TC17 118 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 ZNF184Q99676 751 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 PI4K2AQ9BTU6 479 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 C10orf88Q9H8K7 445 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 BTBD7Q9P203 1132 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 NOD1Q9Y239 953 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 CDY2AQ9Y6F7 541 aa12.97□□□□□ -0.33
CSPG4P13-202ENST00000567704 CDY1Q9Y6F8 540 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms