RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 NCOA4Q13772 614 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 CTC1Q2NKJ3 1217 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 ZNF699Q32M78 642 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 WDR72Q3MJ13 1102 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 TDRD10Q5VZ19 366 aaKnown RBP16.29■□□□□ 0.2
COMMD4-219ENST00000567399 WSCD1Q658N2 575 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 FOXR2Q6PJQ5 311 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 SV2AQ7L0J3 742 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 FRMD5Q7Z6J6 570 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 SLC22A17Q8WUG5 538 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 APOL5Q9BWW9 433 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 IMPG2Q9BZV3 1241 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 DZANK1Q9NVP4 752 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 NXF1Q9UBU9 619 aaKnown RBP16.29■□□□□ 0.2
COMMD4-219ENST00000567399 CD207Q9UJ71 328 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 FBXL5Q9UKA1 691 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 TGM5O43548 720 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 OAZ2O95190 189 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 LETM1O95202 739 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-219ENST00000567399 P4HA1P13674 534 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 ERCC5P28715 1186 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-219ENST00000567399 GTF2H1P32780 548 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 DLX2Q07687 328 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-219ENST00000567399 RAB33AQ14088 237 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 SGSM1Q2NKQ1 1148 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 SKOR2Q2VWA4 1001 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-219ENST00000567399 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 LIN9Q5TKA1 542 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 KRT39Q6A163 491 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 CES5AQ6NT32 575 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 ANKRD54Q6NXT1 300 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 TMEM184AQ6ZMB5 413 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 ZC3H3Q8IXZ2 948 aaKnown RBP16.28■□□□□ 0.2
COMMD4-219ENST00000567399 TMEM86AQ8N2M4 240 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 KREMEN2Q8NCW0 462 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 VN1R2Q8NFZ6 395 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 ATXN2LQ8WWM7 1075 aaKnown RBP16.28■□□□□ 0.2
COMMD4-219ENST00000567399 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-219ENST00000567399 TMEM8AQ9HCN3 771 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 MAN1C1Q9NR34 630 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 GDAP2Q9NXN4 497 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 TMEM63CQ9P1W3 806 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 MAGEC2Q9UBF1 373 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-219ENST00000567399 FAM50BQ9Y247 325 aa16.28■□□□□ 0.2
COMMD4-219ENST00000567399 PRRC2BQ5JSZ5 2229 aaKnown RBP16.27■□□□□ 0.2
COMMD4-219ENST00000567399 OR6C75A6NL08 312 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 ADAM12O43184 909 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 TBX10O75333 385 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 GLP2RO95838 553 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 CYP11A1P05108 521 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 HOXB8P17481 243 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-219ENST00000567399 LTBRP36941 435 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 MXI1P50539 228 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 MYL7Q01449 175 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 PPP3CAQ08209 521 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 MRPL58Q14197 206 aaKnown RBP16.27■□□□□ 0.2
COMMD4-219ENST00000567399 STX1AQ16623 288 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 PUS10Q3MIT2 529 aaKnown RBP16.27■□□□□ 0.2
COMMD4-219ENST00000567399 ZACNQ401N2 412 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 CT47A1Q5JQC4 288 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-219ENST00000567399 SCARA3Q6AZY7 606 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 RBM43Q6ZSC3 357 aaKnown RBP16.27■□□□□ 0.2
COMMD4-219ENST00000567399 DPH6Q7L8W6 267 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.27■□□□□ 0.2
COMMD4-219ENST00000567399 ADGRF2Q8IZF7 708 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 TOP6BLQ8N6T0 577 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 CXorf38Q8TB03 319 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 BORCS6Q96GS4 357 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 SNX25Q9H3E2 840 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 PLEKHA4Q9H4M7 779 aa16.27■□□□□ 0.2
COMMD4-219ENST00000567399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.27■□□□□ 0.2
COMMD4-219ENST00000567399 PRRG1O14668 218 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 HLA-DRAP01903 254 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 LHX1P48742 406 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 TSPY1Q01534 308 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 ROR1Q01973 937 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 CETN1Q12798 172 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 COL19A1Q14993 1142 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 LEXMQ3ZCV2 418 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 WDR44Q5JSH3 913 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 C1orf220Q5T0J3 134 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 RARS2Q5T160 578 aaKnown RBP16.26■□□□□ 0.19
COMMD4-219ENST00000567399 SLC8B1Q6J4K2 584 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 RSPO2Q6UXX9 243 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-219ENST00000567399 CCDC149Q6ZUS6 474 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 FAM114A1Q8IWE2 563 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 PDCL2Q8N4E4 241 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 C12orf76Q8N812 135 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-219ENST00000567399 ZNF461Q8TAF7 563 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 HDAC7Q8WUI4 952 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 TAF4BQ92750 862 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 SFXN1Q9H9B4 322 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 PIDD1Q9HB75 910 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 DDX43Q9NXZ2 648 aaKnown RBP16.26■□□□□ 0.19
COMMD4-219ENST00000567399 CLEC1BQ9P126 229 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 L1RE1Q9UN81 338 aa16.26■□□□□ 0.19
COMMD4-219ENST00000567399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.26■□□□□ 0.19
COMMD4-219ENST00000567399 VNN1O95497 513 aa16.25■□□□□ 0.19
COMMD4-219ENST00000567399 C1RP00736 705 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms