RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 PMLP29590 882 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 CNR2P34972 360 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 EPHA5P54756 1037 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
SPG7-216ENST00000567138 PON2Q15165 354 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 XKR4Q5GH76 650 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 MCTP1Q6DN14 999 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 ALKAL1Q6UXT8 129 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 PHLPP2Q6ZVD8 1323 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 LEMD2Q8NC56 503 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 FAM200AQ8TCP9 573 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 DDX12PQ92771 950 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 MSANTD3Q96H12 275 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 ZFYVE19Q96K21 471 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 SUSD3Q96L08 255 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 ACO2Q99798 780 aaKnown RBP12.3□□□□□ -0.44
SPG7-216ENST00000567138 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 KDM4CQ9H3R0 1056 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 RXFP3Q9NSD7 469 aa12.3□□□□□ -0.44
SPG7-216ENST00000567138 CCDC169A6NNP5 214 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 K7ERI5 159 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 CHADO15335 359 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 MEFVO15553 781 aaPredicted RBP12.29□□□□□ -0.44
SPG7-216ENST00000567138 STX6O43752 255 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 OR4Q2P0C623 313 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 U2AF2P26368 475 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPG7-216ENST00000567138 RPA1P27694 616 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 CTHP32929 405 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
SPG7-216ENST00000567138 WDR5BQ86VZ2 330 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 TMC8Q8IU68 726 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 C12orf50Q8NA57 414 aaPredicted RBP12.29□□□□□ -0.44
SPG7-216ENST00000567138 ERMNQ8TAM6 284 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 DDX1Q92499 740 aaKnown RBP12.29□□□□□ -0.44
SPG7-216ENST00000567138 PGLYRP2Q96PD5 576 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 TARS2Q9BW92 718 aaKnown RBP12.29□□□□□ -0.44
SPG7-216ENST00000567138 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 SMOC1Q9H4F8 434 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 C8orf33Q9H7E9 229 aaPredicted RBP12.29□□□□□ -0.44
SPG7-216ENST00000567138 TUBGCP4Q9UGJ1 667 aa12.29□□□□□ -0.44
SPG7-216ENST00000567138 MYBPHLA2RUH7 354 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 VNN2O95498 520 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 KCNE1P15382 129 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 PXNP49023 591 aaPredicted RBP12.28□□□□□ -0.44
SPG7-216ENST00000567138 PEX3P56589 373 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 FCHO2Q0JRZ9 810 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 ECM1Q16610 540 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 DGKKQ5KSL6 1271 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 PKN3Q6P5Z2 889 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 TAS1R3Q7RTX0 852 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 KIFAP3Q92845 792 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 E2F7Q96AV8 911 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 ACAP3Q96P50 834 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 LRRC3Q9BY71 257 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 MRPL4Q9BYD3 311 aaKnown RBP12.28□□□□□ -0.44
SPG7-216ENST00000567138 DNAJC25Q9H1X3 360 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 CRISPLD1Q9H336 500 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 PTPRHQ9HD43 1115 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 GTSE1Q9NYZ3 720 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 CNTN3Q9P232 1028 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 MTMR6Q9Y217 621 aa12.28□□□□□ -0.44
SPG7-216ENST00000567138 THADAQ6YHU6 1953 aa12.27□□□□□ -0.44
SPG7-216ENST00000567138 EXTL3O43909 919 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 FOXD2O60548 495 aaPredicted RBP12.27□□□□□ -0.45
SPG7-216ENST00000567138 EPN2O95208 641 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 OR52Z1P0C646 297 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 RPL9P32969 192 aaKnown RBP12.27□□□□□ -0.45
SPG7-216ENST00000567138 CCT6AP40227 531 aaKnown RBP12.27□□□□□ -0.45
SPG7-216ENST00000567138 NPTX2P47972 431 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 LIMK1P53667 647 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 MLLT6P55198 1093 aaPredicted RBP12.27□□□□□ -0.45
SPG7-216ENST00000567138 ZNF174Q15697 407 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 SEZ6Q53EL9 994 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 C1orf228Q6PIY5 440 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 KBTBD6Q86V97 674 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 ARID3BQ8IVW6 561 aaPredicted RBP12.27□□□□□ -0.45
SPG7-216ENST00000567138 KRI1Q8N9T8 703 aaKnown RBP12.27□□□□□ -0.45
SPG7-216ENST00000567138 APPL2Q8NEU8 664 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 ZBTB45Q96K62 511 aaPredicted RBP12.27□□□□□ -0.45
SPG7-216ENST00000567138 LRRC3BQ96PB8 259 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 MKNK1Q9BUB5 465 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 GPR88Q9GZN0 384 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 TIMM13Q9Y5L4 95 aaPredicted RBP12.27□□□□□ -0.45
SPG7-216ENST00000567138 SCN1AP35498 2009 aa12.27□□□□□ -0.45
SPG7-216ENST00000567138 LAMA1P25391 3075 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 DPYSL4O14531 572 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 ABLIM1O14639 778 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 SOAT2O75908 522 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 PRAMEF12O95522 483 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 MCF2P10911 925 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 PDIA4P13667 645 aaKnown RBP12.26□□□□□ -0.45
SPG7-216ENST00000567138 MARCKSP29966 332 aaPredicted RBP12.26□□□□□ -0.45
SPG7-216ENST00000567138 TNK2Q07912 1038 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 DUSP4Q13115 394 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 PLD1Q13393 1074 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 ORC2Q13416 577 aaPredicted RBP12.26□□□□□ -0.45
SPG7-216ENST00000567138 PKP1Q13835 747 aa12.26□□□□□ -0.45
SPG7-216ENST00000567138 CCINQ13939 588 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms