RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 AOPEPQ8N6M6 819 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 POMKQ9H5K3 350 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 PIDD1Q9HB75 910 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 HSPBP1Q9NZL4 362 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 FBXW11Q9UKB1 542 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 USTQ9Y2C2 406 aa14.49□□□□□ -0.09
CLK3-218ENST00000566926 R3HCC1Q9Y3T6 440 aaKnown RBP14.49□□□□□ -0.09
CLK3-218ENST00000566926 ANO9A1A5B4 782 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 PI4K2BG5E9Z4 385 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 PIRO00625 290 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 PAPLNO95428 1278 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 ODC1P11926 461 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 TYMPP19971 482 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 ELF1P32519 619 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 PNPLA4P41247 253 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 TAF6P49848 677 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 GUCY2FP51841 1108 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 LILRA4P59901 499 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 TFAMQ00059 246 aaKnown RBP14.48□□□□□ -0.09
CLK3-218ENST00000566926 YWHAHQ04917 246 aaPredicted RBP14.48□□□□□ -0.09
CLK3-218ENST00000566926 LRRC63Q05C16 580 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 PPM1LQ5SGD2 360 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 TPGS2Q68CL5 300 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 SARM1Q6SZW1 724 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 NELFCDQ8IXH7 590 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 XXYLT1Q8NBI6 393 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 ZNF461Q8TAF7 563 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 SMG7Q92540 1137 aaKnown RBP14.48□□□□□ -0.09
CLK3-218ENST00000566926 ACSF2Q96CM8 615 aaPredicted RBP14.48□□□□□ -0.09
CLK3-218ENST00000566926 ANKRD36BP1Q96IX9 119 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 ZNF560Q96MR9 790 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 C1QTNF1Q9BXJ1 281 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 PRKD2Q9BZL6 878 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 AGPAT3Q9NRZ7 376 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 DSEQ9UL01 958 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 MAFFQ9ULX9 164 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 DOCK8Q8NF50 2099 aa14.48□□□□□ -0.09
CLK3-218ENST00000566926 TGFB1I1O43294 461 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 DCXO43602 365 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 TBC1D4O60343 1298 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 XYLBO75191 536 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 RFPL2O75678 378 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 OAZ2O95190 189 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 FGFR1OPO95684 399 aaKnown RBP14.47□□□□□ -0.09
CLK3-218ENST00000566926 C8AP07357 584 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 WEE2P0C1S8 567 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 TMEM191BP0C7N4 346 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 HOXD13P35453 343 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 PRCPP42785 496 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 STK4Q13043 487 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 SV2CQ496J9 727 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 OTOP3Q7RTS5 596 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 RNF135Q8IUD6 432 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 C12orf56Q8IXR9 622 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 EFCAB13Q8IY85 973 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 TDRD5Q8NAT2 981 aaKnown RBP14.47□□□□□ -0.09
CLK3-218ENST00000566926 KIAA0895Q8NCT3 520 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 SENP8Q96LD8 212 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 FBXL5Q9UKA1 691 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 ITGA11Q9UKX5 1188 aa14.47□□□□□ -0.09
CLK3-218ENST00000566926 OR6C75A6NL08 312 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 CLIC2O15247 247 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 ADAM12O43184 909 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 ABLIM3O94929 683 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 TNNC2P02585 160 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 POU2F2P09086 479 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 ATF2P15336 505 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 CCNE1P24864 410 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 ARPP19P56211 112 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 ROR1Q01973 937 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 NCAPHQ15003 741 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 SNRNP35Q16560 246 aaKnown RBP14.46□□□□□ -0.09
CLK3-218ENST00000566926 TPD52L1Q16890 204 aaPredicted RBP14.46□□□□□ -0.09
CLK3-218ENST00000566926 DUOXA2Q1HG44 320 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 OVOS1Q6IE37 1185 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 RSPO2Q6UXX9 243 aaPredicted RBP14.46□□□□□ -0.09
CLK3-218ENST00000566926 METTL23Q86XA0 190 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 ZSWIM2Q8NEG5 633 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 ANKRD20A12PQ8NF67 263 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 NELFBQ8WX92 580 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 FNBP1Q96RU3 617 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 TSG101Q99816 390 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 PDE11AQ9HCR9 933 aa14.46□□□□□ -0.09
CLK3-218ENST00000566926 WDR6Q9NNW5 1121 aaKnown RBP14.46□□□□□ -0.09
CLK3-218ENST00000566926 TSC2P49815 1807 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 KPNA7A9QM74 516 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 PDXKO00764 312 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 PPEF2O14830 753 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 CALUO43852 315 aaPredicted RBP14.45□□□□□ -0.1
CLK3-218ENST00000566926 EXOC3O60645 756 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 CYP11A1P05108 521 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 TPM3P06753 285 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 CPB1P15086 417 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
CLK3-218ENST00000566926 CYP2J2P51589 502 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 RBP5P82980 135 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 MYBPC2Q14324 1141 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 CENPPQ6IPU0 288 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 KLHL10Q6JEL2 608 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms