RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 HDAC7Q8WUI4 952 aa28.11■■■□□ 2.09
NME3-209ENST00000566600 CLEC1BQ9P126 229 aa28.11■■■□□ 2.09
NME3-209ENST00000566600 TIMM13Q9Y5L4 95 aaPredicted RBP28.11■■■□□ 2.09
NME3-209ENST00000566600 TBC1D4O60343 1298 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 STAU1O95793 577 aaKnown RBP28.1■■■□□ 2.09
NME3-209ENST00000566600 GNA14O95837 355 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 EPCAMP16422 314 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 OR1D2P34982 312 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 DPCR1Q3MIW9 517 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 LEXMQ3ZCV2 418 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 ZACNQ401N2 412 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 C1orf220Q5T0J3 134 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 ANKRD54Q6NXT1 300 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 SASS6Q6UVJ0 657 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 PALB2Q86YC2 1186 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 FBXL5Q9UKA1 691 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 BARX2Q9UMQ3 279 aaPredicted RBP28.1■■■□□ 2.09
NME3-209ENST00000566600 BRWD1Q9NSI6 2320 aa28.1■■■□□ 2.09
NME3-209ENST00000566600 CST3P01034 146 aaPredicted RBP28.09■■■□□ 2.09
NME3-209ENST00000566600 TRIM49P0CI25 452 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 TRIM49CP0CI26 452 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 ERCC5P28715 1186 aaPredicted RBP28.09■■■□□ 2.09
NME3-209ENST00000566600 MRPS5P82675 430 aaKnown RBP28.09■■■□□ 2.09
NME3-209ENST00000566600 RBM10P98175 930 aaKnown RBP28.09■■■□□ 2.09
NME3-209ENST00000566600 DLX2Q07687 328 aaPredicted RBP28.09■■■□□ 2.09
NME3-209ENST00000566600 NCOA4Q13772 614 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 PUS10Q3MIT2 529 aaKnown RBP28.09■■■□□ 2.09
NME3-209ENST00000566600 CCDC40Q4G0X9 1142 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 SV2AQ7L0J3 742 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 DPH6Q7L8W6 267 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 TMEM86AQ8N2M4 240 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 TOP6BLQ8N6T0 577 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 SPATA18Q8TC71 538 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 PLEKHA4Q9H4M7 779 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 CD207Q9UJ71 328 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 SNX9Q9Y5X1 595 aa28.09■■■□□ 2.09
NME3-209ENST00000566600 OR6C75A6NL08 312 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 H3BQ06 376 aaPredicted RBP28.08■■■□□ 2.09
NME3-209ENST00000566600 TGM5O43548 720 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 KLHL40Q2TBA0 621 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 LILRA6Q6PI73 481 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 C15orf39Q6ZRI6 1047 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 THEM5Q8N1Q8 247 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 TAF4BQ92750 862 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 MSLNLQ96KJ4 702 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 SRRTQ9BXP5 876 aaKnown RBP28.08■■■□□ 2.09
NME3-209ENST00000566600 TMEM8AQ9HCN3 771 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 PRUNE2Q8WUY3 3088 aa28.08■■■□□ 2.09
NME3-209ENST00000566600 SPDYE4A6NLX3 237 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 ADAM12O43184 909 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 GCLMP48507 274 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 MYL6P60660 151 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 TFF2Q03403 129 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 SGSM1Q2NKQ1 1148 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 TCERG1LQ5VWI1 586 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 WSCD1Q658N2 575 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 SCARA3Q6AZY7 606 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 RSPO2Q6UXX9 243 aaPredicted RBP28.07■■■□□ 2.08
NME3-209ENST00000566600 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.07■■■□□ 2.08
NME3-209ENST00000566600 VRTNQ9H8Y1 702 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 TMEM63CQ9P1W3 806 aa28.07■■■□□ 2.08
NME3-209ENST00000566600 PPP3CAQ08209 521 aa28.06■■■□□ 2.08
NME3-209ENST00000566600 TPD52L1Q16890 204 aaPredicted RBP28.06■■■□□ 2.08
NME3-209ENST00000566600 DCAF17Q5H9S7 520 aaPredicted RBP28.06■■■□□ 2.08
NME3-209ENST00000566600 TPGS2Q68CL5 300 aa28.06■■■□□ 2.08
NME3-209ENST00000566600 KRT39Q6A163 491 aa28.06■■■□□ 2.08
NME3-209ENST00000566600 CAVIN1Q6NZI2 390 aaKnown RBP28.06■■■□□ 2.08
NME3-209ENST00000566600 KREMEN2Q8NCW0 462 aa28.06■■■□□ 2.08
NME3-209ENST00000566600 ZNF461Q8TAF7 563 aa28.06■■■□□ 2.08
NME3-209ENST00000566600 MAN1C1Q9NR34 630 aa28.06■■■□□ 2.08
NME3-209ENST00000566600 ANO10Q9NW15 660 aa28.06■■■□□ 2.08
NME3-209ENST00000566600 FAM50BQ9Y247 325 aa28.06■■■□□ 2.08
NME3-209ENST00000566600 CLSTN1O94985 981 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 VNN1O95497 513 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 CCDC192P0DO97 292 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 PIK3CAP42336 1068 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 TNNC1P63316 161 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 ROR1Q01973 937 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 ZNF699Q32M78 642 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 WDR72Q3MJ13 1102 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 PDCL2Q8N4E4 241 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 IMPG2Q9BZV3 1241 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 XYLT2Q9H1B5 865 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 MMRN2Q9H8L6 949 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 SFXN1Q9H9B4 322 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 FBXW11Q9UKB1 542 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 MAFFQ9ULX9 164 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 L1RE1Q9UN81 338 aa28.05■■■□□ 2.08
NME3-209ENST00000566600 PLXNA3P51805 1871 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 TSC2P49815 1807 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 HLA-DRAP01903 254 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 FAM163BP0C2L3 166 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 CPB1P15086 417 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 LHX1P48742 406 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 MXI1P50539 228 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 MARSP56192 900 aaKnown RBP28.04■■■□□ 2.08
NME3-209ENST00000566600 ARPP19P56211 112 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 ITIH3Q06033 890 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 STX1AQ16623 288 aa28.04■■■□□ 2.08
NME3-209ENST00000566600 SKOR2Q2VWA4 1001 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms