RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 PLXNA1Q9UIW2 1896 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 RBM47A0AV96 593 aaKnown RBP14.19□□□□□ -0.14
LINC00563-201ENST00000566370 GLTPD2A6NH11 291 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ZBTB42B2RXF5 422 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 PDHXO00330 501 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 EIF3HO15372 352 aaKnown RBP eCLIP14.19□□□□□ -0.14
LINC00563-201ENST00000566370 FAM189A1O60320 539 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 KRT19P08727 400 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 NUDT17P0C025 328 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 INSRRP14616 1297 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ATF2P15336 505 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 DESP17661 470 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 MMP8P22894 467 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ADORA2AP29274 412 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 IRAK1P51617 712 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 CLCN3P51790 818 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 WNT7BP56706 349 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ARHGAP1Q07960 439 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ADCY2Q08462 1091 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
LINC00563-201ENST00000566370 MAMLD1Q13495 774 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 TRADDQ15628 312 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ZNF792Q3KQV3 632 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 SEZ6Q53EL9 994 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 DLK2Q6UY11 383 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ZNF365Q70YC5 407 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 SPATS2Q86XZ4 545 aaKnown RBP14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ATL2Q8NHH9 583 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ZBTB9Q96C00 473 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 SNF8Q96H20 258 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 PARK7Q99497 189 aaKnown RBP14.19□□□□□ -0.14
LINC00563-201ENST00000566370 CDT1Q9H211 546 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 NEUROG2Q9H2A3 272 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 CYP3A43Q9HB55 503 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 PTPRHQ9HD43 1115 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ZDHHC18Q9NUE0 388 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 MORF4L1Q9UBU8 362 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 ASIC3Q9UHC3 531 aa14.19□□□□□ -0.14
LINC00563-201ENST00000566370 CHORDC1Q9UHD1 332 aaPredicted RBP14.19□□□□□ -0.14
LINC00563-201ENST00000566370 CCL15-CCL14A0A0B4J2E2 113 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 EDN1P05305 212 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 HOXC6P09630 235 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 CD19P15391 556 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 ATP5DP30049 168 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 IGBP1P78318 339 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 KRT17Q04695 432 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 ZNF844Q08AG5 666 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 PTK6Q13882 451 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 CCL15Q16663 113 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 HADHQ16836 314 aaKnown RBP14.18□□□□□ -0.14
LINC00563-201ENST00000566370 KCTD16Q68DU8 428 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 LRRC31Q6UY01 552 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 MICALCLQ6ZW33 695 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 TRMT10CQ7L0Y3 403 aaKnown RBP14.18□□□□□ -0.14
LINC00563-201ENST00000566370 DPP9Q86TI2 863 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 ZNF410Q86VK4 478 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 CCDC89Q8N998 374 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 COPS5Q92905 334 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 CCDC114Q96M63 670 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 FOXP3Q9BZS1 431 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 SYNCQ9H7C4 482 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 EFCC1Q9HA90 598 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.18□□□□□ -0.14
LINC00563-201ENST00000566370 BCCIPQ9P287 314 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC00563-201ENST00000566370 USTQ9Y2C2 406 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 NR2E1Q9Y466 385 aa14.18□□□□□ -0.14
LINC00563-201ENST00000566370 RRN3P2A6NIE6 340 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 ABLIM1O14639 778 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 TJP3O95049 919 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 CDH5P33151 784 aaPredicted RBP14.17□□□□□ -0.14
LINC00563-201ENST00000566370 RPL21P46778 160 aaKnown RBP14.17□□□□□ -0.14
LINC00563-201ENST00000566370 SNX16P57768 344 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 UAP1Q16222 522 aaPredicted RBP14.17□□□□□ -0.14
LINC00563-201ENST00000566370 CCNG2Q16589 344 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 DCAF4L1Q3SXM0 396 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 DNAJC21Q5F1R6 531 aaKnown RBP14.17□□□□□ -0.14
LINC00563-201ENST00000566370 C6orf118Q5T5N4 469 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 AADACL2Q6P093 401 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 B4GALNT4Q76KP1 1039 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 C3orf20Q8ND61 904 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 IPO4Q8TEX9 1081 aaKnown RBP14.17□□□□□ -0.14
LINC00563-201ENST00000566370 TRAPPC12Q8WVT3 735 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 NLRP7Q8WX94 980 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 ART4Q93070 314 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 ELMO3Q96BJ8 720 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 DDX27Q96GQ7 796 aaKnown RBP14.17□□□□□ -0.14
LINC00563-201ENST00000566370 OSBPL8Q9BZF1 889 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 DCLK3Q9C098 648 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 LHX5Q9H2C1 402 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 PTPN22Q9Y2R2 807 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 UMODL1Q5DID0 1318 aa14.17□□□□□ -0.14
LINC00563-201ENST00000566370 EBAG9O00559 213 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 CST3P01034 146 aaPredicted RBP14.16□□□□□ -0.14
LINC00563-201ENST00000566370 KRT1P04264 644 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 STAG3L1P0CL83 205 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 CYP2C8P10632 490 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 RARGP13631 454 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 BRD2P25440 801 aaKnown RBP14.16□□□□□ -0.14
LINC00563-201ENST00000566370 OSTNP61366 133 aa14.16□□□□□ -0.14
LINC00563-201ENST00000566370 BYSLQ13895 437 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms