RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TAB2Q9NYJ8 693 aa8.78□□□□□ -1
CDH13-208ENST00000566333 LIMA1Q9UHB6 759 aaKnown RBP8.78□□□□□ -1
CDH13-208ENST00000566333 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
CDH13-208ENST00000566333 L1RE1Q9UN81 338 aa8.78□□□□□ -1
CDH13-208ENST00000566333 POLIQ9UNA4 740 aa8.78□□□□□ -1
CDH13-208ENST00000566333 NUB1Q9Y5A7 615 aa8.78□□□□□ -1
CDH13-208ENST00000566333 NME7Q9Y5B8 376 aa8.78□□□□□ -1
CDH13-208ENST00000566333 IRAK3Q9Y616 596 aa8.78□□□□□ -1
CDH13-208ENST00000566333 NOTCH4Q99466 2003 aa8.78□□□□□ -1
CDH13-208ENST00000566333 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 C2orf71A6NGG8 1288 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 LGALS16A8MUM7 142 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 P4HA2O15460 535 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 ADAM12O43184 909 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 HCRTO43612 131 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 TBC1D4O60343 1298 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 N4BP1O75113 896 aaKnown RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 PHACTR2O75167 634 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 URODP06132 367 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 ODC1P11926 461 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 TYMPP19971 482 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 POU3F3P20264 500 aaPredicted RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 ATICP31939 592 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 COPB1P53618 953 aaKnown RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 KRT17Q04695 432 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 ELAVL2Q12926 359 aaKnown RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 TRPC3Q13507 836 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 MRPL58Q14197 206 aaKnown RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 SOWAHAQ2M3V2 549 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 USP41Q3LFD5 358 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 WSCD1Q658N2 575 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 PRSS55Q6UWB4 352 aaPredicted RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 RSPO2Q6UXX9 243 aaPredicted RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 SCARA5Q6ZMJ2 495 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 ADGRD2Q7Z7M1 963 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 OSTM1Q86WC4 334 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 TOP6BLQ8N6T0 577 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 LNX1Q8TBB1 728 aaPredicted RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 MYLIPQ8WY64 445 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 CDX2Q99626 313 aaPredicted RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 ARID3AQ99856 593 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 TTPALQ9BTX7 342 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 BCO2Q9BYV7 579 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 SDCBP2Q9H190 292 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 NDST4Q9H3R1 872 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.77□□□□□ -1.01
CDH13-208ENST00000566333 ENTPD7Q9NQZ7 604 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 RAB20Q9NX57 234 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 GCNT4Q9P109 453 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 MAGEC2Q9UBF1 373 aaPredicted RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 MTRRQ9UBK8 725 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 STK39Q9UEW8 545 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 TIMM13Q9Y5L4 95 aaPredicted RBP8.77□□□□□ -1.01
CDH13-208ENST00000566333 SNX9Q9Y5X1 595 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 MTCH2Q9Y6C9 303 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 DOCK8Q8NF50 2099 aa8.77□□□□□ -1.01
CDH13-208ENST00000566333 GTPBP10A4D1E9 387 aaKnown RBP8.76□□□□□ -1.01
CDH13-208ENST00000566333 LRRC10BA6NIK2 292 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 SMTNL1A8MU46 457 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 C2CD2LO14523 706 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 CYB561D2O14569 222 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 TRAPPC3O43617 180 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 OAZ2O95190 189 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
CDH13-208ENST00000566333 RPL17P18621 184 aaKnown RBP8.76□□□□□ -1.01
CDH13-208ENST00000566333 PAX3P23760 479 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 RAP1GAPP47736 663 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 APBA1Q02410 837 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 MYO1EQ12965 1108 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 SMC1AQ14683 1233 aaKnown RBP8.76□□□□□ -1.01
CDH13-208ENST00000566333 PSMD5Q16401 504 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 CCDC142Q17RM4 750 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 WDR72Q3MJ13 1102 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 VWA3BQ502W6 1294 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 TRIM65Q6PJ69 517 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 DSTYKQ6XUX3 929 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 TMC7Q7Z402 723 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 ARHGEF19Q8IW93 802 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 GPR65Q8IYL9 337 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 ADGRF2Q8IZF7 708 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 UBR7Q8N806 425 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 MRPL43Q8N983 215 aaKnown RBP8.76□□□□□ -1.01
CDH13-208ENST00000566333 RNF214Q8ND24 703 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 OR10T2Q8NGX3 314 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 RIN2Q8WYP3 895 aaPredicted RBP8.76□□□□□ -1.01
CDH13-208ENST00000566333 TAF4BQ92750 862 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 CLSTN3Q9BQT9 956 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 CRACR2AQ9BSW2 395 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 NIF3L1Q9GZT8 377 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 INTS2Q9H0H0 1204 aaKnown RBP8.76□□□□□ -1.01
CDH13-208ENST00000566333 RXFP1Q9HBX9 757 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 SIX2Q9NPC8 291 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 HMGXB4Q9UGU5 601 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 PUF60Q9UHX1 559 aaKnown RBP8.76□□□□□ -1.01
CDH13-208ENST00000566333 AJAP1Q9UKB5 411 aaPredicted RBP8.76□□□□□ -1.01
CDH13-208ENST00000566333 ANAPC1Q9H1A4 1944 aa8.76□□□□□ -1.01
CDH13-208ENST00000566333 BECN2A8MW95 431 aa8.75□□□□□ -1.01
CDH13-208ENST00000566333 GABRDO14764 452 aa8.75□□□□□ -1.01
CDH13-208ENST00000566333 TEX28O15482 410 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms