RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	GPR32	O75388	356 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	CALCA	P01258	141 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	ACO1	P21399	889 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	PROZ	P22891	400 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	MAGEA10	P43363	369 aa	Predicted RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	SLC7A5	Q01650	507 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	MCL1	Q07820	350 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	BFSP2	Q13515	415 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	TFDP1	Q14186	410 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	MFSD5	Q6N075	450 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	C8orf74	Q6P047	294 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	TSHZ1	Q6ZSZ6	1077 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	GSPT2	Q8IYD1	628 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	NLRP7	Q8WX94	980 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	SCLT1	Q96NL6	688 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	FZD8	Q9H461	694 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	PTPRH	Q9HD43	1115 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	OGT	O15294	1046 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	MTA2	O94776	668 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	TMOD1	P28289	359 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	PTEN	P60484	403 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	MBTD1	Q05BQ5	628 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	CASP8	Q14790	479 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	MAP9	Q49MG5	647 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	GLE1	Q53GS7	698 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	SCARA3	Q6AZY7	606 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	C11orf63	Q6NUN7	778 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	RASGEF1C	Q8N431	466 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	CALR3	Q96L12	384 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	HINFP	Q9BQA5	517 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	TCHP	Q9BT92	498 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	SELENOO	Q9BVL4	669 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	CELF4	Q9BZC1	486 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	AGO3	Q9H9G7	860 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	STIM2	Q9P246	746 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	CTTNBP2NL	Q9P2B4	639 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	NOC2L	Q9Y3T9	749 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	TRPV2	Q9Y5S1	764 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	NR2E3	Q9Y5X4	410 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	PGRMC1	O00264	195 aa	Known RBP	10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	ACKR2	O00590	384 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	B4GALT5	O43286	388 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	ATMIN	O43313	823 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	CYP1A2	P05177	515 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	CLTA	P09496	248 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	NOP14	P78316	857 aa	Known RBP	10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	CUL2	Q13617	745 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	CLEC16A	Q2KHT3	1053 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	DCAF12L1	Q5VU92	463 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	MPZL3	Q6UWV2	235 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	C16orf59	Q7L2K0	433 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	RSPH3	Q86UC2	560 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	WDR49	Q8IV35	697 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	AEN	Q8WTP8	325 aa	Known RBP	10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	KRT12	Q99456	494 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	ADAMTS10	Q9H324	1103 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	MINDY3	Q9H8M7	445 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	CPSF3	Q9UKF6	684 aa	Known RBP	10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	NUB1	Q9Y5A7	615 aa		10.83	□□□□□ -0.68
TCF4-231	ENST00000566279	INO80B-WBP1	J3KQ70	363 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279		M0QZ92	97 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	ASAP2	O43150	1006 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	IBSP	P21815	317 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	TNFRSF8	P28908	595 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	CD52	P31358	61 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	AP3M2	P53677	418 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	FPGS	Q05932	587 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	PDE4C	Q08493	712 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	NCOA4	Q13772	614 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	SMC1A	Q14683	1233 aa	Known RBP	10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	LPIN1	Q14693	890 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	ATF7IP2	Q5U623	682 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	EEF1DP3	Q658K8	133 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	ACAD10	Q6JQN1	1059 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	NFKBIZ	Q9BYH8	718 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	INO80B	Q9C086	356 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	IFT122	Q9HBG6	1241 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	GTF3C4	Q9UKN8	822 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	PCDHB2	Q9Y5E7	798 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	PHACTR2	O75167	634 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	GLI1	P08151	1106 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	UNG	P13051	313 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	TNNC1	P63316	161 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	FBXO47	Q5MNV8	452 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	C9orf50	Q5SZB4	431 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	OTOP2	Q7RTS6	562 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	RPAIN	Q86UA6	219 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	TMEM199	Q8N511	208 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	ZNF653	Q96CK0	615 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	NUP85	Q9BW27	656 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	MTMR12	Q9C0I1	747 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	CNTN6	Q9UQ52	1028 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279	ALG6	Q9Y672	507 aa		10.82	□□□□□ -0.68
TCF4-231	ENST00000566279		H3BQF6	201 aa		10.81	□□□□□ -0.68
TCF4-231	ENST00000566279	ASS1	P00966	412 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms