RNA–Protein interactions for RNA: ENST00000566233.5

RAB11A-205, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-205ENST00000566233 PCDHB13Q9Y5F0 798 aa12.92□□□□□ -0.34
RAB11A-205ENST00000566233 PI15O43692 258 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 IL18RAPO95256 599 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 CYP11A1P05108 521 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 PDIA4P13667 645 aaKnown RBP12.91□□□□□ -0.34
RAB11A-205ENST00000566233 PTPN2P17706 415 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 GARTP22102 1010 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 MYBPC2Q14324 1141 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 CNNM4Q6P4Q7 775 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 ALYREFQ86V81 257 aaKnown RBP12.91□□□□□ -0.34
RAB11A-205ENST00000566233 HS6ST3Q8IZP7 471 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 SYCP3Q8IZU3 236 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 ARHGEF3Q9NR81 526 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 FAM86C1Q9NVL1 165 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 RBAKQ9NYW8 714 aaPredicted RBP12.91□□□□□ -0.34
RAB11A-205ENST00000566233 PCDHA7Q9UN72 937 aa12.91□□□□□ -0.34
RAB11A-205ENST00000566233 MTMR11A4FU01 709 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 GOLGA8IPA6NC78 632 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 GOLGA8JA6NMD2 632 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 EXTL3O43909 919 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 MOSPD3O75425 235 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 PAX3P23760 479 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 FCARP24071 287 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 HOXD13P35453 343 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 ME1P48163 572 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 TAF6P49848 677 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 MRE11P49959 708 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 EPHA5P54756 1037 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 GPC5P78333 572 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 ASIC1P78348 528 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 DNM1Q05193 864 aaKnown RBP12.9□□□□□ -0.34
RAB11A-205ENST00000566233 GPR17Q13304 367 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 RESP18Q5W5W9 173 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 PDZD4Q76G19 769 aaPredicted RBP12.9□□□□□ -0.34
RAB11A-205ENST00000566233 NT5DC4Q86YG4 428 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 TTC9BQ8N6N2 239 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 C1orf127Q8N9H9 656 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 MCRS1Q96EZ8 462 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 BORCS6Q96GS4 357 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 PYM1Q9BRP8 204 aaKnown RBP12.9□□□□□ -0.34
RAB11A-205ENST00000566233 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 DNAJC25Q9H1X3 360 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 PCIF1Q9H4Z3 704 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 TMEM206Q9H813 350 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 TBC1D17Q9HA65 648 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 GDE1Q9NZC3 331 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 WDR87Q6ZQQ6 2873 aa12.9□□□□□ -0.34
RAB11A-205ENST00000566233 H0Y858 1186 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 CYB561D2O14569 222 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 POLR2DO15514 142 aaKnown RBP12.89□□□□□ -0.35
RAB11A-205ENST00000566233 ECI2O75521 394 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 CASP1P29466 404 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
RAB11A-205ENST00000566233 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
RAB11A-205ENST00000566233 EHHADHQ08426 723 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 DUSP4Q13115 394 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 FAM26FQ5R3K3 315 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 SCARA3Q6AZY7 606 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 ATL3Q6DD88 541 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 IQCEQ6IPM2 695 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 CENPPQ6IPU0 288 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 ARMCX5Q6P1M9 558 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 EPM2AIP1Q7L775 607 aaPredicted RBP12.89□□□□□ -0.35
RAB11A-205ENST00000566233 TMC8Q8IU68 726 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 CCDC105Q8IYK2 499 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 ELMOD1Q8N336 334 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 ATAD1Q8NBU5 361 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 CXorf38Q8TB03 319 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 ZNF560Q96MR9 790 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 C7orf25Q9BPX7 421 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 ASAH2Q9NR71 780 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 DSEQ9UL01 958 aa12.89□□□□□ -0.35
RAB11A-205ENST00000566233 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 COL4A2P08572 1712 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 CFAP54Q96N23 3096 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 ZNF197O14709 1029 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
RAB11A-205ENST00000566233 SOAT2O75908 522 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 MICAL2O94851 1124 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
RAB11A-205ENST00000566233 ITGB3P05106 788 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 MYL4P12829 197 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 GJA1P17302 382 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 AMPD3Q01432 767 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 PLD1Q13393 1074 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 SV2CQ496J9 727 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 SLC39A12Q504Y0 691 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 FAM78AQ5JUQ0 283 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 WSCD1Q658N2 575 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 TANGO2Q6ICL3 276 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 STXBP4Q6ZWJ1 553 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 GPD1LQ8N335 351 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 SHKBP1Q8TBC3 707 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 NOC3LQ8WTT2 800 aaKnown RBP12.88□□□□□ -0.35
RAB11A-205ENST00000566233 CHAMP1Q96JM3 812 aa12.88□□□□□ -0.35
RAB11A-205ENST00000566233 ZNF512Q96ME7 567 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms