RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 NYXQ9GZU5 481 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
UBFD1-205ENST00000566136 TAF1P21675 1872 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 UBE2Q2LH0YL09 131 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 SKAP2O75563 359 aaPredicted RBP11.48□□□□□ -0.57
UBFD1-205ENST00000566136 EDN3P14138 238 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 ALAS2P22557 587 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 STK38Q15208 465 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 DMRTA1Q5VZB9 504 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 C11orf57Q6ZUT1 292 aaPredicted RBP11.48□□□□□ -0.57
UBFD1-205ENST00000566136 DPP9Q86TI2 863 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 NLRP3Q96P20 1036 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 CGRRF1Q99675 332 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 ZNF576Q9H609 170 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 CYP26B1Q9NR63 512 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 TOMM22Q9NS69 142 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 TRIM17Q9Y577 477 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 ZMYM6O95789 1325 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 FLT1P17948 1338 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 WDR19Q8NEZ3 1342 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 A0A1B0GVL5 298 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 CHURC1-FNTBB4DL54 471 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 KINO60870 393 aaKnown RBP11.48□□□□□ -0.57
UBFD1-205ENST00000566136 MYCLP12524 364 aaPredicted RBP11.48□□□□□ -0.57
UBFD1-205ENST00000566136 FSTL1Q12841 308 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 MTFR2Q6P444 385 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 USP53Q70EK8 1073 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 ADAT2Q7Z6V5 191 aaKnown RBP11.48□□□□□ -0.57
UBFD1-205ENST00000566136 ANKRD49Q8WVL7 239 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 CD244Q9BZW8 370 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 KCNF1Q9H3M0 494 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 DNAJC28Q9NX36 388 aa11.48□□□□□ -0.57
UBFD1-205ENST00000566136 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
UBFD1-205ENST00000566136 KRT37O76014 449 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 GYG1P46976 350 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 LSSP48449 732 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 GSK3AP49840 483 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 FSTL4Q6MZW2 842 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 GPR149Q86SP6 731 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 ENGASEQ8NFI3 743 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 OR1N1Q8NGS0 311 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 IGDCC4Q8TDY8 1250 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 STYXQ8WUJ0 223 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 HERVK_113Q902F9 699 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 PYM1Q9BRP8 204 aaKnown RBP11.47□□□□□ -0.57
UBFD1-205ENST00000566136 RPAP3Q9H6T3 665 aaPredicted RBP11.47□□□□□ -0.57
UBFD1-205ENST00000566136 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 ZNF277Q9NRM2 450 aaPredicted RBP11.47□□□□□ -0.57
UBFD1-205ENST00000566136 GMIPQ9P107 970 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 ZNF624Q9P2J8 865 aaPredicted RBP11.47□□□□□ -0.57
UBFD1-205ENST00000566136 SLC4A4Q9Y6R1 1079 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 DOCK2Q92608 1830 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 A0A0B4J269 797 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 POTEB3A0JP26 581 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 CAPN9O14815 690 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 NPC1O15118 1278 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 PTP4A3O75365 173 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 DDNO94850 711 aaPredicted RBP11.47□□□□□ -0.57
UBFD1-205ENST00000566136 RARBP10826 455 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 STMN1P16949 149 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 TMOD1P28289 359 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 DNM2P50570 870 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 CRY2Q49AN0 593 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 CTXN3Q4LDR2 81 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 ATL3Q6DD88 541 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 POTEBQ6S5H4 581 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 CISD2Q8N5K1 135 aaKnown RBP11.47□□□□□ -0.57
UBFD1-205ENST00000566136 DNAJC5GQ8N7S2 189 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 LINC00301Q8NCQ3 95 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 TMEM41AQ96HV5 264 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 FEM1BQ9UK73 627 aa11.47□□□□□ -0.57
UBFD1-205ENST00000566136 H3BML4 177 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 IFIT3O14879 490 aaKnown RBP11.46□□□□□ -0.57
UBFD1-205ENST00000566136 ZBTB43O43298 467 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 SRGAP2O75044 1071 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 PTGS1P23219 599 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 ALDH1B1P30837 517 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 PHKA2P46019 1235 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 NDUFA8P51970 172 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 TMED1Q13445 227 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 USP45Q70EL2 814 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 OTUD6AQ7L8S5 288 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 ADGRA1Q86SQ6 560 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 CELF5Q8N6W0 485 aaKnown RBP11.46□□□□□ -0.57
UBFD1-205ENST00000566136 MRPS27Q92552 414 aaKnown RBP11.46□□□□□ -0.57
UBFD1-205ENST00000566136 POLR3CQ9BUI4 534 aaPredicted RBP11.46□□□□□ -0.57
UBFD1-205ENST00000566136 TRIM5Q9C035 493 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 PYCARDQ9ULZ3 195 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 SIK3Q9Y2K2 1263 aa11.46□□□□□ -0.57
UBFD1-205ENST00000566136 SMIM22K7EJ46 135 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 RANBP6O60518 1105 aaKnown RBP11.46□□□□□ -0.58
UBFD1-205ENST00000566136 NDUFS2O75306 463 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 PRKAA2P54646 552 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 ARL4CP56559 192 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 ALX1Q15699 326 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 CLEC16AQ2KHT3 1053 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms