RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 RBM12Q9NTZ6 932 aaKnown RBP13.93□□□□□ -0.18
RNF40-208ENST00000565995 C2orf42Q9NWW7 574 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 ANGPTL2Q9UKU9 493 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 YIPF1Q9Y548 306 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 PLXND1Q9Y4D7 1925 aa13.93□□□□□ -0.18
RNF40-208ENST00000565995 SPEGQ15772 3267 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 CACNA1GO43497 2377 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 A0A1W2PRU2 124 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 SLC38A8A6NNN8 435 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 FGF19O95750 216 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 CPB1P15086 417 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 CYP3A5P20815 502 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
RNF40-208ENST00000565995 MCM4P33991 863 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 CCT6AP40227 531 aaKnown RBP13.92□□□□□ -0.18
RNF40-208ENST00000565995 KPNA1P52294 538 aaPredicted RBP13.92□□□□□ -0.18
RNF40-208ENST00000565995 EPHB3P54753 998 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 YWHAHQ04917 246 aaPredicted RBP13.92□□□□□ -0.18
RNF40-208ENST00000565995 MAPK7Q13164 816 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 C8orf34Q49A92 452 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 PLA2G2CQ5R387 149 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 N4BP2L1Q5TBK1 243 aaPredicted RBP13.92□□□□□ -0.18
RNF40-208ENST00000565995 CENPPQ6IPU0 288 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 Q6ZS52 159 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 IGSF22Q8N9C0 903 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 ZC3H10Q96K80 434 aaKnown RBP13.92□□□□□ -0.18
RNF40-208ENST00000565995 CRISPLD1Q9H336 500 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 PLEKHA5Q9HAU0 1116 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 KIAA1024Q9UPX6 916 aa13.92□□□□□ -0.18
RNF40-208ENST00000565995 AKAP13Q12802 2813 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 OR6C75A6NL08 312 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 CCDC169A6NNP5 214 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 TOM1L1O75674 476 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 AKAP3O75969 853 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 EPN2O95208 641 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 SOX9P48436 509 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 PLCB2Q00722 1185 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 MYBPC2Q14324 1141 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 ZNF174Q15697 407 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 IL31Q6EBC2 164 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 C1orf186Q6ZWK4 172 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 GAREM2Q75VX8 874 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 GAB3Q8WWW8 586 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 KCNN1Q92952 543 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 PSMG2Q969U7 264 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 ZBTB45Q96K62 511 aaPredicted RBP13.91□□□□□ -0.18
RNF40-208ENST00000565995 DRC1Q96MC2 740 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 TSPAN18Q96SJ8 248 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 TCHPQ9BT92 498 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 FOXP1Q9H334 677 aaPredicted RBP13.91□□□□□ -0.18
RNF40-208ENST00000565995 KMT5AQ9NQR1 393 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 GTSE1Q9NYZ3 720 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 LRWD1Q9UFC0 647 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 KCNG1Q9UIX4 513 aa13.91□□□□□ -0.18
RNF40-208ENST00000565995 ASCC3Q8N3C0 2202 aaKnown RBP13.9□□□□□ -0.18
RNF40-208ENST00000565995 TTC26A0AVF1 554 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 JAK2O60674 1132 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 EIF5BO60841 1220 aaKnown RBP13.9□□□□□ -0.18
RNF40-208ENST00000565995 HIP1RO75146 1068 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 ADRB2P07550 413 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 TYMPP19971 482 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 ALDH1A3P47895 512 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 TRAPPC10P48553 1259 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
RNF40-208ENST00000565995 DUSP4Q13115 394 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 DMP1Q13316 513 aaPredicted RBP13.9□□□□□ -0.18
RNF40-208ENST00000565995 PON2Q15165 354 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 STXBP5Q5T5C0 1151 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 HEATR6Q6AI08 1181 aaKnown RBP13.9□□□□□ -0.18
RNF40-208ENST00000565995 RINT1Q6NUQ1 792 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 ZPBP2Q6X784 338 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 CEP68Q76N32 757 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 CACNA2D4Q7Z3S7 1137 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 DNAJB7Q7Z6W7 309 aaPredicted RBP13.9□□□□□ -0.18
RNF40-208ENST00000565995 SPIRE2Q8WWL2 714 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 TIPINQ9BVW5 301 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 LSM14BQ9BX40 385 aaKnown RBP13.9□□□□□ -0.18
RNF40-208ENST00000565995 ARRDC1-AS1Q9H2J1 176 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 SLITRK6Q9H5Y7 841 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 DDX19AQ9NUU7 478 aaKnown RBP13.9□□□□□ -0.18
RNF40-208ENST00000565995 TUBGCP4Q9UGJ1 667 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 DNM3Q9UQ16 869 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 PCDHGA5Q9Y5G8 931 aa13.9□□□□□ -0.18
RNF40-208ENST00000565995 MYO18AQ92614 2054 aaKnown RBP13.89□□□□□ -0.19
RNF40-208ENST00000565995 PAX3P23760 479 aa13.89□□□□□ -0.19
RNF40-208ENST00000565995 HOXC13P31276 330 aa13.89□□□□□ -0.19
RNF40-208ENST00000565995 MCL1Q07820 350 aa13.89□□□□□ -0.19
RNF40-208ENST00000565995 NOLC1Q14978 699 aaKnown RBP eCLIP13.89□□□□□ -0.19
RNF40-208ENST00000565995 SAFBQ15424 915 aaKnown RBP eCLIP13.89□□□□□ -0.19
RNF40-208ENST00000565995 AASDHQ4L235 1098 aaPredicted RBP13.89□□□□□ -0.19
RNF40-208ENST00000565995 HAUS6Q7Z4H7 955 aa13.89□□□□□ -0.19
RNF40-208ENST00000565995 UPF2Q9HAU5 1272 aaKnown RBP13.89□□□□□ -0.19
RNF40-208ENST00000565995 RXFP3Q9NSD7 469 aa13.89□□□□□ -0.19
RNF40-208ENST00000565995 ZMYM5Q9UJ78 669 aa13.89□□□□□ -0.19
RNF40-208ENST00000565995 NBEAQ8NFP9 2946 aa13.89□□□□□ -0.19
RNF40-208ENST00000565995 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
RNF40-208ENST00000565995 DMXL2Q8TDJ6 3036 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 ATRXP46100 2492 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 MTMR11A4FU01 709 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms