RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 NR1I3Q14994 352 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 SV2CQ496J9 727 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 KIAA0319Q5VV43 1072 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 FUT10Q6P4F1 479 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 CCDC112Q8NEF3 446 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 FBXO22Q8NEZ5 403 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 TMEM169Q96HH4 297 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 ZNF560Q96MR9 790 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 VPS16Q9H269 839 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 TTYH1Q9H313 450 aaPredicted RBP13.55□□□□□ -0.24
SF3B3-206ENST00000565990 TAB2Q9NYJ8 693 aa13.55□□□□□ -0.24
SF3B3-206ENST00000565990 PUF60Q9UHX1 559 aaKnown RBP13.55□□□□□ -0.24
SF3B3-206ENST00000565990 MYO9BQ13459 2157 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 A0A1B0GTH6 734 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 EPOPA6NHQ4 379 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 SYN3O14994 580 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 GRM6O15303 877 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 TBC1D4O60343 1298 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 LPXNO60711 386 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 OAZ2O95190 189 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 SOD2P04179 222 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 CYP11A1P05108 521 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 TNNT1P13805 278 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 TYMPP19971 482 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 POU3F3P20264 500 aaPredicted RBP13.54□□□□□ -0.24
SF3B3-206ENST00000565990 DNAJB1P25685 340 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 PON1P27169 355 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 BRCC3P46736 316 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 GPM6BQ13491 265 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 SMYD5Q6GMV2 418 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 TOP6BLQ8N6T0 577 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 SENP8Q96LD8 212 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 LMAN2LQ9H0V9 348 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 MMRN2Q9H8L6 949 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 APOBEC3GQ9HC16 384 aaKnown RBP13.54□□□□□ -0.24
SF3B3-206ENST00000565990 ALG13Q9NP73 1137 aaKnown RBP13.54□□□□□ -0.24
SF3B3-206ENST00000565990 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 NUB1Q9Y5A7 615 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 IRAK3Q9Y616 596 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 SF3B1O75533 1304 aaKnown RBP eCLIP13.54□□□□□ -0.24
SF3B3-206ENST00000565990 ATG2AQ2TAZ0 1938 aa13.54□□□□□ -0.24
SF3B3-206ENST00000565990 LGALS16A8MUM7 142 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 CYB561D2O14569 222 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
SF3B3-206ENST00000565990 GABRDO14764 452 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 FSCN2O14926 492 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 CTSAP10619 480 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 FANCCQ00597 558 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 MYL7Q01449 175 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 DSG1Q02413 1049 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 SOWAHAQ2M3V2 549 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 USP41Q3LFD5 358 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 WDR72Q3MJ13 1102 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 FAM171A1Q5VUB5 890 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 PDE12Q6L8Q7 609 aaKnown RBP13.53□□□□□ -0.24
SF3B3-206ENST00000565990 DSTYKQ6XUX3 929 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 GBP6Q6ZN66 633 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 NYAP1Q6ZVC0 841 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 SPATA18Q8TC71 538 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 ARNTL2Q8WYA1 636 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 TATDN2Q93075 761 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 LRCH3Q96II8 777 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 ERGIC2Q96RQ1 377 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 PI4K2AQ9BTU6 479 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 HERC2P3Q9BVR0 1158 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 ZBP1Q9H171 429 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 FAM124BQ9H5Z6 455 aaPredicted RBP13.53□□□□□ -0.24
SF3B3-206ENST00000565990 CERS4Q9HA82 394 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 LMCD1Q9NZU5 365 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 MTUS1Q9ULD2 1270 aa13.53□□□□□ -0.24
SF3B3-206ENST00000565990 ARHGEF37A1IGU5 675 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 I3L4J1 428 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 TACC1O75410 805 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 SLC9A1P19634 815 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 PIK3CAP42336 1068 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 ERVFC1P60507 584 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 CCZ1BP86790 482 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 CCZ1P86791 482 aaPredicted RBP13.52□□□□□ -0.25
SF3B3-206ENST00000565990 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 ZNF699Q32M78 642 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 ZNF667Q5HYK9 610 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 WDR44Q5JSH3 913 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 PHLDB3Q6NSJ2 640 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 TRIM65Q6PJ69 517 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 VPS52Q8N1B4 723 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 TMEM86AQ8N2M4 240 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 MRPL43Q8N983 215 aaKnown RBP13.52□□□□□ -0.25
SF3B3-206ENST00000565990 APPL2Q8NEU8 664 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 LNX1Q8TBB1 728 aaPredicted RBP13.52□□□□□ -0.25
SF3B3-206ENST00000565990 POF1BQ8WVV4 589 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 CRACR2AQ9BSW2 395 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 TTPALQ9BTX7 342 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 BCO2Q9BYV7 579 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 CYP3A43Q9HB55 503 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 RXFP1Q9HBX9 757 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 SIX2Q9NPC8 291 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 NGRNQ9NPE2 291 aaKnown RBP13.52□□□□□ -0.25
SF3B3-206ENST00000565990 DSEQ9UL01 958 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms