RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 KIAA1468Q9P260 1216 aa14.92□□□□□ -0.02
HERPUD1-210ENST00000565966 ITGA11Q9UKX5 1188 aa14.92□□□□□ -0.02
HERPUD1-210ENST00000565966 TIMM13Q9Y5L4 95 aaPredicted RBP14.92□□□□□ -0.02
HERPUD1-210ENST00000565966 NOTCH4Q99466 2003 aa14.92□□□□□ -0.02
HERPUD1-210ENST00000565966 PTPRJQ12913 1337 aa14.92□□□□□ -0.02
HERPUD1-210ENST00000565966 WDR27A2RRH5 827 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 GOLGA6L22H0YM25 854 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 BIN1O00499 593 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 TNNC2P02585 160 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 ITGB3P05106 788 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 C8AP07357 584 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 HNRNPA1P09651 372 aaKnown RBP eCLIP14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 POLR2BP30876 1174 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 HOXA9P31269 272 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 PNPLA4P41247 253 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 ARPP19P56211 112 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 DUOXA2Q1HG44 320 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 SV2CQ496J9 727 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 PPM1LQ5SGD2 360 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 TPGS2Q68CL5 300 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 OVOS1Q6IE37 1185 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 CENPPQ6IPU0 288 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 CCDC149Q6ZUS6 474 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 CSGALNACT2Q8N6G5 542 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 OR5B17Q8NGF7 314 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 CXorf38Q8TB03 319 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 PLEKHO2Q8TD55 490 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 SMG7Q92540 1137 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 ZNF707Q96C28 371 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 BORCS6Q96GS4 357 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 FNBP1Q96RU3 617 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 MTMR12Q9C0I1 747 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 GZF1Q9H116 711 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 PIDD1Q9HB75 910 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 DSEQ9UL01 958 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 AGAP1Q9UPQ3 857 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 USTQ9Y2C2 406 aa14.91□□□□□ -0.02
HERPUD1-210ENST00000565966 KPNA7A9QM74 516 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 CYB561D2O14569 222 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 CYP11A1P05108 521 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 KRT19P08727 400 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 ATF2P15336 505 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 NR2F2P24468 414 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 ELF1P32519 619 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 RBP5P82980 135 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 EDRF1Q3B7T1 1238 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 CEP135Q66GS9 1140 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 SCARA3Q6AZY7 606 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 RNF135Q8IUD6 432 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 WDR49Q8IV35 697 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 LRRC52Q8N7C0 313 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 SLC7A14Q8TBB6 771 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 GPT2Q8TD30 523 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.022e-11■■□□□ 11.7
HERPUD1-210ENST00000565966 CCDC127Q96BQ5 260 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 CGRRF1Q99675 332 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 WDR6Q9NNW5 1121 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 MAFFQ9ULX9 164 aa14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 R3HCC1Q9Y3T6 440 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-210ENST00000565966 OR6C75A6NL08 312 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 PPP1R3GB7ZBB8 358 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 PI4K2BG5E9Z4 385 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 AKAP3O75969 853 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 DLATP10515 647 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 ALADP13716 330 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 TNNI1P19237 187 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 SP100P23497 879 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 RPL13P26373 211 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 PMS1P54277 932 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 ADAM9Q13443 819 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 STIM1Q13586 685 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 ANKRD40Q6AI12 368 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 METTL23Q86XA0 190 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 PLCD3Q8N3E9 789 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 TRIML1Q8N9V2 468 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 PARD3BQ8TEW8 1205 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 ZNF516Q92618 1163 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 ACSF2Q96CM8 615 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 NUP62CLQ9H1M0 184 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 AFF4Q9UHB7 1163 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 SIX4Q9UIU6 781 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 FRMD4BQ9Y2L6 1034 aa14.89□□□□□ -0.03
HERPUD1-210ENST00000565966 TRIM49BA6NDI0 452 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 LRRIQ3A6PVS8 624 aaPredicted RBP14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 C2CD4DB7Z1M9 353 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 PSMA7O14818 248 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 MAPK13O15264 365 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 XYLBO75191 536 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 POU2F2P09086 479 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 CPB1P15086 417 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 CCNE1P24864 410 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 PPP1R2P41236 205 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 ADCY1Q08828 1119 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 MYO1EQ12965 1108 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 GPR17Q13304 367 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 OTOP3Q7RTS5 596 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 TRAPPC11Q7Z392 1133 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 TCEAL8Q8IYN2 117 aa14.88□□□□□ -0.03
HERPUD1-210ENST00000565966 THEM5Q8N1Q8 247 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms