RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SLITRK3O94933 977 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 SSBP05455 408 aaKnown RBP eCLIP6.82□□□□□ -1.32
UBFD1-204ENST00000565634 OR52Z1P0C646 297 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 TGFB3P10600 412 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 HOXD8P13378 290 aaPredicted RBP6.82□□□□□ -1.32
UBFD1-204ENST00000565634 TRAPPC10P48553 1259 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 FANCCQ00597 558 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 CYP4A11Q02928 519 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 UBE3AQ05086 875 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 UBXN2BQ14CS0 331 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 LRCH2Q5VUJ6 765 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 NCAPH2Q6IBW4 605 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 DCLRE1AQ6PJP8 1040 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 KCNT2Q6UVM3 1135 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 MOXD1Q6UVY6 613 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 TSHZ1Q6ZSZ6 1077 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 CATSPER3Q86XQ3 398 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 CCDC60Q8IWA6 550 aaPredicted RBP6.82□□□□□ -1.32
UBFD1-204ENST00000565634 IGSF22Q8N9C0 903 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 TRAPPC12Q8WVT3 735 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 SECISBP2LQ93073 1101 aaKnown RBP6.82□□□□□ -1.32
UBFD1-204ENST00000565634 FAM129BQ96TA1 746 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 ADAM2Q99965 735 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 HSD17B14Q9BPX1 270 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 SENP7Q9BQF6 1050 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 EIF2AK1Q9BQI3 630 aaKnown RBP6.82□□□□□ -1.32
UBFD1-204ENST00000565634 LMBRD1Q9NUN5 540 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 SLC9A2Q9UBY0 812 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 GMEB2Q9UKD1 530 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 NOL7Q9UMY1 257 aaKnown RBP6.82□□□□□ -1.32
UBFD1-204ENST00000565634 PCDHA12Q9UN75 941 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 SRPRBQ9Y5M8 271 aaKnown RBP6.82□□□□□ -1.32
UBFD1-204ENST00000565634 MYH11P35749 1972 aa6.82□□□□□ -1.32
UBFD1-204ENST00000565634 ASCC3Q8N3C0 2202 aaKnown RBP6.81□□□□□ -1.32
UBFD1-204ENST00000565634 NFASCO94856 1347 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 IGKV6D-21A0A0A0MT36 114 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 NPHP3-ACAD11A0A0J9YXS1 232 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 A0A1B0GVL5 298 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 FAM170BA6NMN3 283 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 NOP56O00567 594 aaKnown RBP6.81□□□□□ -1.32
UBFD1-204ENST00000565634 MAFGO15525 162 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 GAS7O60861 476 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 SASH3O75995 380 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 SPATA31D3P0C874 917 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 GNAT1P11488 350 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 GCFC2P16383 781 aaKnown RBP6.81□□□□□ -1.32
UBFD1-204ENST00000565634 LIG1P18858 919 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 CASP1P29466 404 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 NPEPPSP55786 919 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 GPC5P78333 572 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 MRPS6P82932 125 aaKnown RBP6.81□□□□□ -1.32
UBFD1-204ENST00000565634 PLCB3Q01970 1234 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 PPP2R5CQ13362 524 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 KARSQ15046 597 aaKnown RBP6.81□□□□□ -1.32
UBFD1-204ENST00000565634 STK38Q15208 465 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 SF3A2Q15428 464 aaKnown RBP6.81□□□□□ -1.32
UBFD1-204ENST00000565634 ZRSR1Q15695 479 aaKnown RBP6.81□□□□□ -1.32
UBFD1-204ENST00000565634 LONRF3Q496Y0 759 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 MARCH8Q5T0T0 291 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 METTL7BQ6UX53 244 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 DTHD1Q6ZMT9 781 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 CLEC17AQ6ZS10 378 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 SPATA31D4Q6ZUB0 917 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 CCDC149Q6ZUS6 474 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 OTOP3Q7RTS5 596 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 GRAMD1CQ8IYS0 662 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 ABCA7Q8IZY2 2146 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 PJA1Q8NG27 643 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 NETO1Q8TDF5 533 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 PIGOQ8TEQ8 1089 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 SLC22A17Q8WUG5 538 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 WFDC12Q8WWY7 111 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 STAMQ92783 540 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 SPATA32Q96LK8 384 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 FAM20AQ96MK3 541 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 ZNF396Q96N95 335 aaPredicted RBP6.81□□□□□ -1.32
UBFD1-204ENST00000565634 CEP89Q96ST8 783 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 RIT2Q99578 217 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 SMOC1Q9H4F8 434 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 ARHGEF3Q9NR81 526 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 DISC1Q9NRI5 854 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 SEMA4GQ9NTN9 838 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 GABBR1Q9UBS5 961 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 VTI1BQ9UEU0 232 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 DMXL2Q8TDJ6 3036 aa6.81□□□□□ -1.32
UBFD1-204ENST00000565634 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.8□□□□□ -1.32
UBFD1-204ENST00000565634 E9PMD0 336 aa6.8□□□□□ -1.32
UBFD1-204ENST00000565634 TAF4O00268 1085 aa6.8□□□□□ -1.32
UBFD1-204ENST00000565634 TBX3O15119 743 aa6.8□□□□□ -1.32
UBFD1-204ENST00000565634 MARCH6O60337 910 aa6.8□□□□□ -1.32
UBFD1-204ENST00000565634 CAND2O75155 1236 aa6.8□□□□□ -1.32
UBFD1-204ENST00000565634 DEAF1O75398 565 aaPredicted RBP6.8□□□□□ -1.32
UBFD1-204ENST00000565634 STAM2O75886 525 aa6.8□□□□□ -1.32
UBFD1-204ENST00000565634 MICAL2O94851 1124 aa6.8□□□□□ -1.32
UBFD1-204ENST00000565634 NOS3P29474 1203 aa6.8□□□□□ -1.32
UBFD1-204ENST00000565634 TCF7P36402 384 aaPredicted RBP6.8□□□□□ -1.32
UBFD1-204ENST00000565634 SARSP49591 514 aaKnown RBP6.8□□□□□ -1.32
UBFD1-204ENST00000565634 DAB2P98082 770 aa6.8□□□□□ -1.32
UBFD1-204ENST00000565634 PAK2Q13177 524 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms