RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 WRAP73Q9P2S5 460 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 DKK4Q9UBT3 224 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 DDX25Q9UHL0 483 aaKnown RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 MBD1Q9UIS9 605 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 NAP1L2Q9ULW6 460 aaPredicted RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 APOBEC2Q9Y235 224 aaKnown RBP9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 NUB1Q9Y5A7 615 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 STK24Q9Y6E0 443 aa9.93□□□□□ -0.82
VPS9D1-205ENST00000565452 ACACAQ13085 2346 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 KLF18A0A0U1RQI7 1052 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 LRRIQ4A6NIV6 560 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 J3QKU1 62 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 CAPN9O14815 690 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 SLC27A2O14975 620 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 ZBTB39O15060 712 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 ATXN7O15265 892 aaPredicted RBP9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 TDP2O95551 362 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 CFIP05156 583 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 CPB1P15086 417 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 RPL9P32969 192 aaKnown RBP9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 HOXD12P35452 270 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 SLC14A1Q13336 389 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 PRPF4BQ13523 1007 aaKnown RBP9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 BYSLQ13895 437 aaKnown RBP9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 DUOXA1Q1HG43 343 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 STXBP5Q5T5C0 1151 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 LMBRD2Q68DH5 695 aaPredicted RBP9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 CC2D1AQ6P1N0 951 aaPredicted RBP9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 RNF19BQ6ZMZ0 732 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 APBB1IPQ7Z5R6 666 aaPredicted RBP9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 ZBTB8OSQ8IWT0 167 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 SCUBE3Q8IX30 993 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 KIF2CQ99661 725 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 TPSD1Q9BZJ3 242 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 TMEM74BQ9NUR3 256 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 SLC38A7Q9NVC3 462 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 RGL1Q9NZL6 768 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 ZMYM5Q9UJ78 669 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 TICRRQ7Z2Z1 1910 aa9.92□□□□□ -0.82
VPS9D1-205ENST00000565452 ASCC3Q8N3C0 2202 aaKnown RBP9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 A0A087WV48 116 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 SMIM28A0A1B0GU29 152 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 ALDH1A2O94788 518 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 SLITRK3O94933 977 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 SERPINF2P08697 491 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 BCKDHBP21953 392 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 GABRR2P28476 465 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 DUSP4Q13115 394 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 CTTNQ14247 550 aaKnown RBP9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 NECTIN1Q15223 517 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 DCAF4L1Q3SXM0 396 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 TSGA10IPQ3SY00 556 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 GLRA4Q5JXX5 417 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 CREB3L3Q68CJ9 461 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 GAREM2Q75VX8 874 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 DHX32Q7L7V1 743 aaKnown RBP9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 RABEPKQ7Z6M1 372 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 ITIH5Q86UX2 942 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 TMC8Q8IU68 726 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 TMEFF1Q8IYR6 380 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 PNPLA1Q8N8W4 532 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 C3orf58Q8NDZ4 430 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 DYDC2Q96IM9 177 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 SPACA7Q96KW9 195 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 CNOT6LQ96LI5 555 aaKnown RBP9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 CCDC43Q96MW1 224 aaKnown RBP9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 TBC1D32Q96NH3 1257 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 LSG1Q9H089 658 aaKnown RBP9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 C2orf40Q9H1Z8 148 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 EBF3Q9H4W6 596 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 PDZD7Q9H5P4 517 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 ANO2Q9NQ90 1003 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 SH3GLB2Q9NR46 395 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 ANKEF1Q9NU02 776 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 PILRBQ9UKJ0 227 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 CIZ1Q9ULV3 898 aaPredicted RBP9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 YIPF1Q9Y548 306 aa9.91□□□□□ -0.82
VPS9D1-205ENST00000565452 ACKR2O00590 384 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 PODXLO00592 558 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 SH3BP5O60239 455 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 C1QL1O75973 258 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 SYPP08247 313 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 FTH1P19P0C7X4 201 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 CD59P13987 128 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 YARSP54577 528 aaKnown RBP9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 EXOSC10Q01780 885 aaKnown RBP9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 PDGFRLQ15198 375 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 ANO7Q6IWH7 933 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 TOGARAM2Q6ZUX3 1019 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 RASSF3Q86WH2 238 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 TTC30AQ86WT1 665 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 BEST2Q8NFU1 509 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 CD101Q93033 1021 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 PSMG2Q969U7 264 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 CHFRQ96EP1 664 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 SUSD3Q96L08 255 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 GCNAQ96QF7 691 aa9.9□□□□□ -0.82
VPS9D1-205ENST00000565452 POLR3FQ9H1D9 316 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms