RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PDE11AQ9HCR9 933 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 SLC39A2Q9NP94 309 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 CDH7Q9ULB5 785 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 DUSP12Q9UNI6 340 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 C2CD2Q9Y426 696 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 NUMBLQ9Y6R0 609 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 ANO9A1A5B4 782 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 CYB561D2O14569 222 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 CLIC2O15247 247 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 EXTL3O43909 919 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 PAPLNO95428 1278 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 ITGB3P05106 788 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 KRT19P08727 400 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 PTPN2P17706 415 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 NHLH1Q02575 133 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 BFSP1Q12934 665 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 IER5LQ5T953 404 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 TPGS2Q68CL5 300 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 CNNM4Q6P4Q7 775 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 PARM1Q6UWI2 310 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 TCEAL8Q8IYN2 117 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 HS6ST3Q8IZP7 471 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 ELMOD1Q8N336 334 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 SLC44A3Q8N4M1 653 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 RDH13Q8NBN7 331 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 IPO9Q96P70 1041 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 RPP25Q9BUL9 199 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 AFF4Q9UHB7 1163 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 CA14Q9ULX7 337 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 AGAP1Q9UPQ3 857 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 SLC27A5Q9Y2P5 690 aa14.72□□□□□ -0.05
VPS9D1-204ENST00000565023 SPTBN4Q9H254 2564 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 ARHGEF37A1IGU5 675 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 STK25O00506 426 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 ACTN4O43707 911 aaKnown RBP14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 SOAT2O75908 522 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 OAZ2O95190 189 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 TMEM191BP0C7N4 346 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 SLFN14P0C7P3 912 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 MYL4P12829 197 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 GJA1P17302 382 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 CEBPBP17676 345 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 TYMPP19971 482 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 RFX1P22670 979 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 AVPR2P30518 371 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 HOXD13P35453 343 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 CYP2J2P51589 502 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 NDUFA8P51970 172 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 DUSP4Q13115 394 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 HTR4Q13639 388 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 SLC5A9Q2M3M2 681 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 SV2CQ496J9 727 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 WSCD1Q658N2 575 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 SCARA3Q6AZY7 606 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 IQCEQ6IPM2 695 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 METTL23Q86XA0 190 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 CBWD2Q8IUF1 395 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 NPAS3Q8IXF0 933 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 SIX5Q8N196 739 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 FSIP1Q8NA03 581 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 FGF14Q92915 247 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 TCEAL4Q96EI5 215 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 ZNF512Q96ME7 567 aaPredicted RBP14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 KXD1Q9BQD3 176 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 MTMR12Q9C0I1 747 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 HSPBP1Q9NZL4 362 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 USP25Q9UHP3 1055 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 YIPF1Q9Y548 306 aa14.71□□□□□ -0.05
VPS9D1-204ENST00000565023 MTMR11A4FU01 709 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 OR6C75A6NL08 312 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 EIF3DO15371 548 aaKnown RBP eCLIP14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 VNN2O95498 520 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 SYKP43405 635 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 SLC39A12Q504Y0 691 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 PDZD4Q76G19 769 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 NT5DC4Q86YG4 428 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 CSGALNACT2Q8N6G5 542 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 TTC9BQ8N6N2 239 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 C1orf127Q8N9H9 656 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 ATAD1Q8NBU5 361 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 OR10T2Q8NGX3 314 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 CACTINQ8WUQ7 758 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 ZNF560Q96MR9 790 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 CRISPLD1Q9H336 500 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 GOLPH3LQ9H4A5 285 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 EXOC1Q9NV70 894 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 CEP72Q9P209 647 aa14.7□□□□□ -0.06
VPS9D1-204ENST00000565023 ZNF233A6NK53 670 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 KPNA7A9QM74 516 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 POU2F2P09086 479 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 CYP4A22Q5TCH4 519 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 RTL10Q7L3V2 364 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 EPM2AIP1Q7L775 607 aaPredicted RBP14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 THEM5Q8N1Q8 247 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 PRSS33Q8NF86 280 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 ZNF507Q8TCN5 953 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 FAM200AQ8TCP9 573 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 GPR152Q8TDT2 470 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 SCFD1Q8WVM8 642 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms