RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TOR1BO14657 336 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 MGST3O14880 152 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 SLC16A6O15403 523 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 ANXA1P04083 346 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 LPOP22079 712 aaPredicted RBP6.24□□□□□ -1.41
UBR1-205ENST00000564540 PTH2RP49190 550 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 ANXA11P50995 505 aaKnown RBP6.24□□□□□ -1.41
UBR1-205ENST00000564540 ZNF135P52742 658 aaPredicted RBP6.24□□□□□ -1.41
UBR1-205ENST00000564540 PIGFQ07326 219 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 DYRK1AQ13627 763 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 PREPLQ4J6C6 727 aaPredicted RBP6.24□□□□□ -1.41
UBR1-205ENST00000564540 PRR16Q569H4 304 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 TSHZ1Q6ZSZ6 1077 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 PPP1R3BQ86XI6 285 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 PDSS2Q86YH6 399 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 ADGRG5Q8IZF4 528 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 SLC30A5Q8TAD4 765 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 SCAMP4Q969E2 229 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 MVB12AQ96EY5 273 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 RHOBTB2Q9BYZ6 727 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 LMBRD1Q9NUN5 540 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 INTS13Q9NVM9 706 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 GNL3LQ9NVN8 582 aaKnown RBP6.24□□□□□ -1.41
UBR1-205ENST00000564540 CFAP97Q9P2B7 532 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 AGAP1Q9UPQ3 857 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 DMTF1Q9Y222 760 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 ANKRD6Q9Y2G4 727 aa6.24□□□□□ -1.41
UBR1-205ENST00000564540 POLRMTO00411 1230 aaKnown RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 ARIH2O95376 493 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 MATN4O95460 622 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 AHSGP02765 367 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 CT47B1P0C2W7 299 aaPredicted RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 FTH1P19P0C7X4 201 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 AKAP5P24588 427 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 POU6F2P78424 691 aaPredicted RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 SIM1P81133 766 aaPredicted RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 MRPS35P82673 323 aaKnown RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 PIN1Q13526 163 aaPredicted RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 ZNF267Q14586 743 aaPredicted RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 ZNF169Q14929 603 aaPredicted RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 SLC30A10Q6XR72 485 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 TMPRSS9Q7Z410 1059 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 GRAMD1CQ8IYS0 662 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 SIMC1Q8NDZ2 872 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 LPIN2Q92539 896 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 NUP88Q99567 741 aaPredicted RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 SMOQ99835 787 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 MRPL46Q9H2W6 279 aaKnown RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 WDCPQ9H6R7 721 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 FEZ2Q9UHY8 353 aaPredicted RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.23□□□□□ -1.41
UBR1-205ENST00000564540 PCDHA1Q9Y5I3 950 aa6.23□□□□□ -1.41
UBR1-205ENST00000564540 YY2O15391 372 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 AKAP10O43572 662 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 ALDH2P05091 517 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 TYRP14679 529 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 RAB27AP51159 221 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 HABP2Q14520 560 aaPredicted RBP6.22□□□□□ -1.41
UBR1-205ENST00000564540 KIF22Q14807 665 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 VWA1Q6PCB0 445 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 ACTRT2Q8TDY3 377 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 SNX19Q92543 992 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 HPS3Q969F9 1004 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 MAP3K14Q99558 947 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 RTFDC1Q9BY42 306 aaPredicted RBP6.22□□□□□ -1.41
UBR1-205ENST00000564540 SMOC2Q9H3U7 446 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 GPR35Q9HC97 309 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 KMT5AQ9NQR1 393 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 RLIMQ9NVW2 624 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 FOXJ2Q9P0K8 574 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 LRIT1Q9P2V4 623 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 NEU2Q9Y3R4 380 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 NR2E3Q9Y5X4 410 aa6.22□□□□□ -1.41
UBR1-205ENST00000564540 H3BUI4 141 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 PEX1O43933 1283 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 VPS4BO75351 444 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 KIF20AO95235 890 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 SRGNP10124 158 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 RARBP10826 455 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 CHRM3P20309 590 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 ERCC6LQ2NKX8 1250 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 CCDC157Q569K6 752 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 POC1BQ8TC44 478 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 JPH3Q8WXH2 748 aaPredicted RBP6.21□□□□□ -1.42
UBR1-205ENST00000564540 SLC9A6Q92581 669 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 TINAGL1Q9GZM7 467 aaPredicted RBP6.21□□□□□ -1.42
UBR1-205ENST00000564540 SLC12A5Q9H2X9 1139 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 R3HDMLQ9H3Y0 253 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 PNPOQ9NVS9 261 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 ETAA1Q9NY74 926 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 ZNF180Q9UJW8 692 aa6.21□□□□□ -1.42
UBR1-205ENST00000564540 AP1G1O43747 822 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 PPFIA2O75334 1257 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 PPP3CBP16298 524 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 VCAM1P19320 739 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 NCLP19338 710 aaKnown RBP6.2□□□□□ -1.42
UBR1-205ENST00000564540 NPTX2P47972 431 aa6.2□□□□□ -1.42
UBR1-205ENST00000564540 HNRNPMP52272 730 aaKnown RBP eCLIP6.2□□□□□ -1.42
UBR1-205ENST00000564540 EXOSC9Q06265 439 aaKnown RBP6.2□□□□□ -1.42
UBR1-205ENST00000564540 PLS1Q14651 629 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms