RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 C8orf76Q96K31 380 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 FAM20AQ96MK3 541 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 POLR3FQ9H1D9 316 aaPredicted RBP17.43■□□□□ 0.38
RNF40-205ENST00000563909 KCNMB3Q9NPA1 279 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
RNF40-205ENST00000563909 FAM221BA6H8Z2 402 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 RNF40O75150 1001 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 DGAT1O75907 488 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 RDXP35241 583 aaKnown RBP17.42■□□□□ 0.38
RNF40-205ENST00000563909 PLCB2Q00722 1185 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
RNF40-205ENST00000563909 BECN1Q14457 450 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 PTPAQ15257 358 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 NPY5RQ15761 445 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 CTXN3Q4LDR2 81 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 NCAPH2Q6IBW4 605 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 KRT25Q7Z3Z0 450 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 CYP2U1Q7Z449 544 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 ADAM32Q8TC27 787 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 LRRC3Q9BY71 257 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 FZD8Q9H461 694 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 BRMS1Q9HCU9 246 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 AFF4Q9UHB7 1163 aaKnown RBP17.42■□□□□ 0.38
RNF40-205ENST00000563909 USP20Q9Y2K6 914 aa17.42■□□□□ 0.38
RNF40-205ENST00000563909 H0Y626 953 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 TRIM16O95361 564 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 APBB3O95704 486 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 HSP90AA1P07900 732 aaKnown RBP17.41■□□□□ 0.38
RNF40-205ENST00000563909 MAPK8P45983 427 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 SCAPQ12770 1279 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 PRPF4BQ13523 1007 aaKnown RBP17.41■□□□□ 0.38
RNF40-205ENST00000563909 MRPL58Q14197 206 aaKnown RBP17.41■□□□□ 0.38
RNF40-205ENST00000563909 PMS2CLQ68D20 193 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 HNRNPLLQ8WVV9 542 aaKnown RBP17.41■□□□□ 0.38
RNF40-205ENST00000563909 ADPGKQ9BRR6 497 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 GJB4Q9NTQ9 266 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 EBF1Q9UH73 591 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 MAFFQ9ULX9 164 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 ARID2Q68CP9 1835 aa17.41■□□□□ 0.38
RNF40-205ENST00000563909 NAV2Q8IVL1 2488 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 CACNA1EQ15878 2313 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 SYN3O14994 580 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 MARCH6O60337 910 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 SLITRK3O94933 977 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 EGFP01133 1207 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 KRT2P35908 639 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 FOSBP53539 338 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
RNF40-205ENST00000563909 FAM187BQ17R55 369 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 PPP4R3AQ6IN85 833 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 RNF19BQ6ZMZ0 732 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 TMC8Q8IU68 726 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 ZBTB8OSQ8IWT0 167 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 GLIS3Q8NEA6 775 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 BPIFB1Q8TDL5 484 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 PIGKQ92643 395 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 CCDC43Q96MW1 224 aaKnown RBP17.4■□□□□ 0.38
RNF40-205ENST00000563909 THG1LQ9NWX6 298 aaKnown RBP17.4■□□□□ 0.38
RNF40-205ENST00000563909 OBP2AQ9NY56 170 aa17.4■□□□□ 0.38
RNF40-205ENST00000563909 ASCC3Q8N3C0 2202 aaKnown RBP17.4■□□□□ 0.38
RNF40-205ENST00000563909 NUP205Q92621 2012 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 TRDMT1O14717 391 aaKnown RBP17.39■□□□□ 0.37
RNF40-205ENST00000563909 CPB1P15086 417 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 GCFC2P16383 781 aaKnown RBP17.39■□□□□ 0.37
RNF40-205ENST00000563909 DGKEP52429 567 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 SOX4Q06945 474 aaPredicted RBP17.39■□□□□ 0.37
RNF40-205ENST00000563909 LMAN2Q12907 356 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 EEF1DP3Q658K8 133 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 MAEAQ7L5Y9 396 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 NEK8Q86SG6 692 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 PIP4P1Q86T03 277 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 FBXO18Q8NFZ0 1043 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 HAS1Q92839 578 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 LRIG1Q96JA1 1093 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 ATXN3LQ9H3M9 355 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 FBRSL1Q9HCM7 1045 aaKnown RBP17.39■□□□□ 0.37
RNF40-205ENST00000563909 GPRC5CQ9NQ84 441 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 GKN1Q9NS71 199 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 ANKEF1Q9NU02 776 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 YIPF1Q9Y548 306 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 ATG2BQ96BY7 2078 aa17.39■□□□□ 0.37
RNF40-205ENST00000563909 KIF26AQ9ULI4 1882 aaPredicted RBP17.39■□□□□ 0.37
RNF40-205ENST00000563909 SMIM28A0A1B0GU29 152 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 PODXLO00592 558 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 CCNT1O60563 726 aaKnown RBP17.38■□□□□ 0.37
RNF40-205ENST00000563909 PRAMEF12O95522 483 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 LIG1P18858 919 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 PDCP20941 246 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 DHPSP49366 369 aaPredicted RBP17.38■□□□□ 0.37
RNF40-205ENST00000563909 EPHB3P54753 998 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 USP39Q53GS9 565 aaKnown RBP17.38■□□□□ 0.37
RNF40-205ENST00000563909 TRIM61Q5EBN2 209 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 GPR158Q5T848 1215 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 LARP1BQ659C4 914 aaKnown RBP17.38■□□□□ 0.37
RNF40-205ENST00000563909 CDCA2Q69YH5 1023 aaPredicted RBP17.38■□□□□ 0.37
RNF40-205ENST00000563909 ZNF280DQ6N043 979 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 SYT13Q7L8C5 426 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 C11orf74Q86VG3 221 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 RPLP0P6Q8NHW5 317 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms