RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 SOAT2O75908 522 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 TYMPP19971 482 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 LIG4P49917 911 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 ZNF131P52739 623 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 GAS6Q14393 721 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 DHX8Q14562 1220 aaKnown RBP18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 PUM1Q14671 1186 aaKnown RBP eCLIP18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 RABEP1Q15276 862 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 RSPO4Q2I0M5 234 aaPredicted RBP18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 WDR44Q5JSH3 913 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 SPATA1Q5VX52 437 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 OVOS1Q6IE37 1185 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 CENPPQ6IPU0 288 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 GPBP1Q86WP2 473 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 GPIHBP1Q8IV16 184 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 ATAD1Q8NBU5 361 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 LRRC3BQ96PB8 259 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 MKNK1Q9BUB5 465 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 OXCT2Q9BYC2 517 aaPredicted RBP18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 LMAN1LQ9HAT1 526 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 NCDNQ9UBB6 729 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 CPSF3Q9UKF6 684 aaKnown RBP18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 KIF3AQ9Y496 699 aa18.25■□□□□ 0.51
HDGFL3-203ENST00000563404 K7ENM7 598 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 ZNF263O14978 683 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 NFICP08651 508 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 CHRNB1P11230 501 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 TGM1P22735 817 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 CCNE1P24864 410 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 LILRA4P59901 499 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 MCM6Q14566 821 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 JADE1Q6IE81 842 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 MAMSTRQ6ZN01 415 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 GAREM2Q75VX8 874 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 USP37Q86T82 979 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 MYCT1Q8N699 235 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 SENP8Q96LD8 212 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 AK8Q96MA6 479 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 SLITRK6Q9H5Y7 841 aa18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 RPF1Q9H9Y2 349 aaKnown RBP18.24■□□□□ 0.51
HDGFL3-203ENST00000563404 TISP43B9A030 160 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 ANKRD63C9JTQ0 380 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 H3BQV1 296 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 NMT1P30419 496 aaKnown RBP18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 SOX9P48436 509 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 CDR1P51861 262 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 EPHB3P54753 998 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 PLD1Q13393 1074 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 MYBPC2Q14324 1141 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 KYAT1Q16773 422 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 C9orf57Q5W0N0 161 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 OR10T2Q8NGX3 314 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 FAM212AQ96EL1 285 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 MSTO1Q9BUK6 570 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 GPR88Q9GZN0 384 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 PARVGQ9HBI0 331 aa18.23■□□□□ 0.51
HDGFL3-203ENST00000563404 NCOR2Q9Y618 2525 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 TSC2P49815 1807 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 PIRO00625 290 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 SLC26A4O43511 780 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 XPOTO43592 962 aaKnown RBP18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 TRAK2O60296 914 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 FAM13AO94988 1023 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 PLCG1P19174 1290 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 SATB1Q01826 763 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 FCHO2Q0JRZ9 810 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 KARSQ15046 597 aaKnown RBP18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 DNAJB7Q7Z6W7 309 aaPredicted RBP18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 ARID3BQ8IVW6 561 aaPredicted RBP18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 RAD54LQ92698 747 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 PSMG2Q969U7 264 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 TSPAN18Q96SJ8 248 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 FAM126AQ9BYI3 521 aaPredicted RBP18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 IKZF4Q9H2S9 585 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 PARD6AQ9NPB6 346 aa18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.22■□□□□ 0.51
HDGFL3-203ENST00000563404 ANO9A1A5B4 782 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 SLC38A8A6NNN8 435 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 CHADO15335 359 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 ODC1P11926 461 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 UBA7P41226 1012 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 ALDH1A3P47895 512 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 ACOT2P49753 483 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 GTF2BQ00403 316 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 DMWDQ09019 674 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 ZC2HC1CQ53FD0 456 aaPredicted RBP18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 TXNDC11Q6PKC3 985 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 E2F7Q96AV8 911 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 CALML4Q96GE6 196 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 LPIN3Q9BQK8 851 aa18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 RBM12Q9NTZ6 932 aaKnown RBP18.21■□□□□ 0.51
HDGFL3-203ENST00000563404 ANK1P16157 1881 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 CYP11A1P05108 521 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 MLLT6P55198 1093 aaPredicted RBP18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 TMEM132DQ14C87 1099 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 LPAL2Q16609 132 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 SLC39A12Q504Y0 691 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 CD302Q8IX05 232 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 TTC8Q8TAM2 541 aa18.2■□□□□ 0.5
HDGFL3-203ENST00000563404 ZFYVE19Q96K21 471 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms