RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ADCK5Q3MIX3 580 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 HP1BP3Q5SSJ5 553 aaPredicted RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 SNX30Q5VWJ9 437 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 NUTM2GQ5VZR2 741 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 ANKRD34AQ69YU3 496 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 PRR23CQ6ZRP0 262 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 Q6ZS46 218 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 KIAA1211Q6ZU35 1233 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 CDH24Q86UP0 819 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 ARHGEF25Q86VW2 580 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 AGGF1Q8N302 714 aaeCLIP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 CELF5Q8N6W0 485 aaKnown RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 FAM71BQ8TC56 605 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 AFG1LQ8WV93 481 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 RGMAQ96B86 450 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 NSUN4Q96CB9 384 aaKnown RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 COG8Q96MW5 612 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 PDCD2LQ9BRP1 358 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 DSCC1Q9BVC3 393 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 OR10A4Q9H209 315 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 TRMT1Q9NXH9 659 aaKnown RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 EPS15L1Q9UBC2 864 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 SF3B6Q9Y3B4 125 aaKnown RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 NSD3Q9BZ95 1437 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 FLT4P35916 1363 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 A0A1W2PPL8 197 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 PRSS38A1L453 326 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 HMX3A6NHT5 357 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 MPHOSPH10O00566 681 aaKnown RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 AP3D1O14617 1153 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 ERAL1O75616 437 aaKnown RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 FAM155BO75949 473 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 PGM3O95394 542 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 MLYCDO95822 493 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 DLGAP3O95886 979 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 CST3P01034 146 aaPredicted RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 CD3EP07766 207 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 STMN1P16949 149 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 DESP17661 470 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 ADSLP30566 484 aaPredicted RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 CCR9P51686 369 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 CLCN2P51788 898 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 RNASE9P60153 205 aaKnown RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 SLC12A1Q13621 1099 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 UBE3CQ15386 1083 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 INF2Q27J81 1249 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 CTXN3Q4LDR2 81 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 PLEKHO1Q53GL0 409 aaPredicted RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 ARHGAP15Q53QZ3 475 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 FDX2Q6P4F2 183 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 SHQ1Q6PI26 577 aaKnown RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 ZNF783Q6ZMS7 281 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 NLRP14Q86W24 1093 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 NME9Q86XW9 330 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 NOSTRINQ8IVI9 506 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 OR8H3Q8N146 312 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 OR1N1Q8NGS0 311 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 TTLL11Q8NHH1 800 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 OTUD7AQ8TE49 926 aaPredicted RBP5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 AUTS2Q8WXX7 1259 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 PTPN18Q99952 460 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 COL20A1Q9P218 1284 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 RNF112Q9ULX5 631 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 ZNF281Q9Y2X9 895 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 PCDHB1Q9Y5F3 818 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 STRCP1A6NGW2 1772 aa5.74□□□□□ -1.49
VPS35P1-201ENST00000563400 FLT1P17948 1338 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 AFF2P51816 1311 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 WDR17Q8IZU2 1322 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 SCO2A0A1W2PP80 73 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 PODXLO00592 558 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 SCDO00767 359 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 AURKAO14965 403 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 PIP5K1BO14986 540 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 LRRN2O75325 713 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 WISP1O95388 367 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 NDST3O95803 873 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 SLFN14P0C7P3 912 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 MYL4P12829 197 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 MTHFD2P13995 350 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 IL2RBP14784 551 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 IFNGR1P15260 489 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 RCAN1P53805 252 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 RNF4P78317 190 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 NKX6-1P78426 367 aaPredicted RBP5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 UBXN1Q04323 297 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 CHRNDQ07001 517 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 ADAM9Q13443 819 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 TRIM29Q14134 588 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 SLMAPQ14BN4 828 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 WTAPQ15007 396 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 SEC23AQ15436 765 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 C1orf141Q5JVX7 400 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 ZBTB41Q5SVQ8 909 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 CC2D1BQ5T0F9 858 aaKnown RBP5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 CNSTQ6PJW8 725 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 IL27RAQ6UWB1 636 aa5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 R3HCC1LQ7Z5L2 792 aaKnown RBP5.73□□□□□ -1.49
VPS35P1-201ENST00000563400 TMC3Q7Z5M5 1100 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms