RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 ALAS1P13196 640 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 CYBAP13498 195 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 LCP1P13796 627 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 RGS2P41220 211 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 LIFRP42702 1097 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 IKQ13123 557 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-205ENST00000563283 STK3Q13188 491 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 LSAMPQ13449 338 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 ANKRD1Q15327 319 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 QRICH1Q2TAL8 776 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 ZFYVE27Q5T4F4 411 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 NT5DC1Q5TFE4 455 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 APOA5Q6Q788 366 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 MAMDC4Q6UXC1 1216 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 MILR1Q7Z6M3 343 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 ZC3H18Q86VM9 953 aaKnown RBP5.88□□□□□ -1.47
CNOT1-205ENST00000563283 SGMS1Q86VZ5 419 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 TMTC2Q8N394 836 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 SRBD1Q8N5C6 995 aaKnown RBP5.88□□□□□ -1.47
CNOT1-205ENST00000563283 U2AF1L4Q8WU68 220 aaKnown RBP5.88□□□□□ -1.47
CNOT1-205ENST00000563283 DEFB118Q96PH6 123 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 PIGSQ96S52 555 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 AGXT2Q9BYV1 514 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.88□□□□□ -1.47
CNOT1-205ENST00000563283 VAT1LQ9HCJ6 419 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 ST7Q9NRC1 585 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 RNF146Q9NTX7 359 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 CYP39A1Q9NYL5 469 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 TPCN1Q9ULQ1 816 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 PCDHA2Q9Y5H9 948 aa5.88□□□□□ -1.47
CNOT1-205ENST00000563283 hCG_1642624A0A1W2PR95 340 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 CTAGE5O15320 804 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 DTNBO60941 627 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 LARGE1O95461 756 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 PARP1P09874 1014 aaKnown RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 THBS2P35442 1172 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 GRIA2P42262 883 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 SARSP49591 514 aaKnown RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 METAP2P50579 478 aaKnown RBP eCLIP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 CCT2P78371 535 aaKnown RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 SMAD4Q13485 552 aaKnown RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 BAATQ14032 418 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 KCTD2Q14681 263 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 CDC37Q16543 378 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 SKOR2Q2VWA4 1001 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 ASPRV1Q53RT3 343 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 EMC4Q5J8M3 183 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 GPATCH4Q5T3I0 446 aaKnown RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 ANO1Q5XXA6 986 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 SLC30A10Q6XR72 485 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 DPP9Q86TI2 863 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 HSCBQ8IWL3 235 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 FBXL16Q8N461 479 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 FAM26EQ8N5C1 309 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 NECAB1Q8N987 351 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 KYQ8NBH2 561 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 CHST13Q8NET6 341 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 CTCFLQ8NI51 663 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 MORC4Q8TE76 937 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 DIS3LQ8TF46 1054 aaKnown RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 KCTD13Q8WZ19 329 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 SGSM3Q96HU1 749 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 MAP3K14Q99558 947 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 C11orf84Q9BUA3 381 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 ALDH8A1Q9H2A2 487 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 SLKQ9H2G2 1235 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 NCOA5Q9HCD5 579 aaKnown RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 NGRNQ9NPE2 291 aaKnown RBP5.87□□□□□ -1.47
CNOT1-205ENST00000563283 PDGFCQ9NRA1 345 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 OGDHLQ9ULD0 1010 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 CCPG1Q9ULG6 757 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 LIMCH1Q9UPQ0 1083 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 RPTORQ8N122 1335 aa5.87□□□□□ -1.47
CNOT1-205ENST00000563283 CPLX1O14810 134 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 DHX16O60231 1041 aaKnown RBP5.86□□□□□ -1.47
CNOT1-205ENST00000563283 NOBOXO60393 691 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 TADA3O75528 432 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 CELA3BP08861 270 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 CALM1P0DP23 149 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 CALM2P0DP24 149 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 CALM3P0DP25 149 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 COL6A1P12109 1028 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 PDIA3P30101 505 aaKnown RBP5.86□□□□□ -1.47
CNOT1-205ENST00000563283 KIF5BP33176 963 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 MCM2P49736 904 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 EVCP57679 992 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 RPS6P62753 249 aaKnown RBP5.86□□□□□ -1.47
CNOT1-205ENST00000563283 GHRHRQ02643 423 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 NTRK3Q16288 839 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 ME3Q16798 604 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 TKFCQ3LXA3 575 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 USH1GQ495M9 461 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 CCSAPQ6IQ19 270 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-205ENST00000563283 TAPT1Q6NXT6 567 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 CD300LDQ6UXZ3 194 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 CCAR1Q8IX12 1150 aaKnown RBP5.86□□□□□ -1.47
CNOT1-205ENST00000563283 FANCBQ8NB91 859 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 PIBF1Q8WXW3 757 aa5.86□□□□□ -1.47
CNOT1-205ENST00000563283 TAAR1Q96RJ0 339 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms