RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 EIF3DO15371 548 aaKnown RBP eCLIP13.58□□□□□ -0.24
PKM-208ENST00000563275 EXTL3O43909 919 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 PRPF6O94906 941 aaKnown RBP13.58□□□□□ -0.24
PKM-208ENST00000563275 CPB1P15086 417 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 CEBPBP17676 345 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 FCARP24071 287 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 DNM1Q05193 864 aaKnown RBP13.58□□□□□ -0.24
PKM-208ENST00000563275 SCARA3Q6AZY7 606 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 CENPPQ6IPU0 288 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 DSTYKQ6XUX3 929 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 USP37Q86T82 979 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 GPR152Q8TDT2 470 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 TCEAL4Q96EI5 215 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 TMEM209Q96SK2 561 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 DNAJC25Q9H1X3 360 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 HSFX1Q9UBD0 423 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 DSEQ9UL01 958 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 YIPF1Q9Y548 306 aa13.58□□□□□ -0.24
PKM-208ENST00000563275 MTMR11A4FU01 709 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 POLR2DO15514 142 aaKnown RBP13.57□□□□□ -0.24
PKM-208ENST00000563275 PI15O43692 258 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 ECI2O75521 394 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 LDHAP00338 332 aaKnown RBP13.57□□□□□ -0.24
PKM-208ENST00000563275 HSP90AA1P07900 732 aaKnown RBP13.57□□□□□ -0.24
PKM-208ENST00000563275 CFHP08603 1231 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 TAF6P49848 677 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 AMPD3Q01432 767 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 TWF1Q12792 350 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 UNC13DQ70J99 1090 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 TMC8Q8IU68 726 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 C1orf127Q8N9H9 656 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 LEMD2Q8NC56 503 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 ST13P5Q8NFI4 369 aaPredicted RBP13.57□□□□□ -0.24
PKM-208ENST00000563275 ZNF507Q8TCN5 953 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 ING5Q8WYH8 240 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 CORO1BQ9BR76 489 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 ZCWPW1Q9H0M4 648 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 RBAKQ9NYW8 714 aaPredicted RBP13.57□□□□□ -0.24
PKM-208ENST00000563275 SIX4Q9UIU6 781 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 FBXL21Q9UKT6 434 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 CFAP45Q9UL16 551 aa13.57□□□□□ -0.24
PKM-208ENST00000563275 GOLGA8IPA6NC78 632 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 GOLGA8JA6NMD2 632 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 KPNA7A9QM74 516 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 CYB561D2O14569 222 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 ZNF197O14709 1029 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 TGFB1I1O43294 461 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 PNPLA4P41247 253 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 ME1P48163 572 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 STARD6P59095 220 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 GPC5P78333 572 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 ASIC1P78348 528 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 DUSP4Q13115 394 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 BMT2Q1RMZ1 405 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 FOXD4L6Q3SYB3 417 aaPredicted RBP13.56□□□□□ -0.24
PKM-208ENST00000563275 FAM26FQ5R3K3 315 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 WSCD1Q658N2 575 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 FOXD4L3Q6VB84 417 aaPredicted RBP13.56□□□□□ -0.24
PKM-208ENST00000563275 STXBP4Q6ZWJ1 553 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 HS6ST3Q8IZP7 471 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 SYCP3Q8IZU3 236 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 GPD1LQ8N335 351 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 TTC9BQ8N6N2 239 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 LRRC52Q8N7C0 313 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 ATAD1Q8NBU5 361 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 SCFD1Q8WVM8 642 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 FAM84AQ96KN4 292 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 PGLYRP2Q96PD5 576 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 PHOX2BQ99453 314 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 DDX23Q9BUQ8 820 aaKnown RBP13.56□□□□□ -0.24
PKM-208ENST00000563275 MFSD1Q9H3U5 465 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 ARHGEF3Q9NR81 526 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 DLGAP2Q9P1A6 1054 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 UBE4BO95155 1302 aa13.56□□□□□ -0.24
PKM-208ENST00000563275 PVALEFA0A1B0GWK0 134 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 ACTN4O43707 911 aaKnown RBP13.55□□□□□ -0.24
PKM-208ENST00000563275 SLFN14P0C7P3 912 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 CASP1P29466 404 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 TFAMQ00059 246 aaKnown RBP13.55□□□□□ -0.24
PKM-208ENST00000563275 PLD1Q13393 1074 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 SV2CQ496J9 727 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 FAM78AQ5JUQ0 283 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 ARMCX5Q6P1M9 558 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 PDZD4Q76G19 769 aaPredicted RBP13.55□□□□□ -0.24
PKM-208ENST00000563275 LIMS2Q7Z4I7 341 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 LRRTM3Q86VH5 581 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 CBWD2Q8IUF1 395 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 CCDC105Q8IYK2 499 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 FLCNQ8NFG4 579 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 ELSPBP1Q96BH3 223 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 MCRS1Q96EZ8 462 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 ZNF512Q96ME7 567 aaPredicted RBP13.55□□□□□ -0.24
PKM-208ENST00000563275 ZSWIM3Q96MP5 696 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 ZNF560Q96MR9 790 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 ASB16Q96NS5 453 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 KXD1Q9BQD3 176 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
PKM-208ENST00000563275 PLA2G2FQ9BZM2 168 aa13.55□□□□□ -0.24
PKM-208ENST00000563275 PCIF1Q9H4Z3 704 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms