RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 BORCS6Q96GS4 357 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 MSLNLQ96KJ4 702 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 SUSD3Q96L08 255 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 KLHL5Q96PQ7 755 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 TTPALQ9BTX7 342 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.69□□□□□ -1.343e-6■■□□□ 12.1
CNOT1-204ENST00000563130 INTS13Q9NVM9 706 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 DPP3Q9NY33 737 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 CLDND1Q9NY35 253 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 FNIP2Q9P278 1114 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 THEGQ9P2T0 379 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 HCFC2Q9Y5Z7 792 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 VCANP13611 3396 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 I3L4J1 428 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 SYN3O14994 580 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 MAPK13O15264 365 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 TBC1D4O60343 1298 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 EXOC3O60645 756 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 DXOO77932 396 aaKnown RBP6.69□□□□□ -1.34
CNOT1-204ENST00000563130 JUNDP17535 347 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 PAX3P23760 479 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 CASP4P49662 377 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 RBM10P98175 930 aaKnown RBP6.69□□□□□ -1.34
CNOT1-204ENST00000563130 SCARA3Q6AZY7 606 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 KIAA1841Q6NSI8 718 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 FOXR2Q6PJQ5 311 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 WDR49Q8IV35 697 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.69□□□□□ -1.34
CNOT1-204ENST00000563130 ZC3H3Q8IXZ2 948 aaKnown RBP6.69□□□□□ -1.34
CNOT1-204ENST00000563130 C1orf127Q8N9H9 656 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 TRIML1Q8N9V2 468 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 OR5B17Q8NGF7 314 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 PRR7Q8TB68 274 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 PLEKHO2Q8TD55 490 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 PARD3BQ8TEW8 1205 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 FAM84AQ96KN4 292 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 CLSTN3Q9BQT9 956 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 CLSTN2Q9H4D0 955 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 IGFLR1Q9H665 355 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 PRDM9Q9NQV7 894 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 NUB1Q9Y5A7 615 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 VWA8A3KMH1 1905 aa6.69□□□□□ -1.34
CNOT1-204ENST00000563130 C2CD2LO14523 706 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 CALUO43852 315 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-204ENST00000563130 AKAP3O75969 853 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 PAPLNO95428 1278 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 KCNA5P22460 613 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 NR2F2P24468 414 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 TKTP29401 623 aaKnown RBP6.68□□□□□ -1.34
CNOT1-204ENST00000563130 MCM4P33991 863 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 CLCN4P51793 760 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 PMS1P54277 932 aaKnown RBP6.68□□□□□ -1.34
CNOT1-204ENST00000563130 TFAMQ00059 246 aaKnown RBP6.68□□□□□ -1.34
CNOT1-204ENST00000563130 TFF2Q03403 129 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 CAMK4Q16566 473 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 LEXMQ3ZCV2 418 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 PDXDC1Q6P996 788 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 LILRA6Q6PI73 481 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 PRSS55Q6UWB4 352 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-204ENST00000563130 PPFIBP1Q86W92 1011 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 GPT2Q8TD30 523 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 CACTINQ8WUQ7 758 aaKnown RBP6.68□□□□□ -1.34
CNOT1-204ENST00000563130 RIN2Q8WYP3 895 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-204ENST00000563130 PCMTD1Q96MG8 357 aaPredicted RBP6.68□□□□□ -1.34
CNOT1-204ENST00000563130 EMILIN2Q9BXX0 1053 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 MTMR12Q9C0I1 747 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 MTRRQ9UBK8 725 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 SIX4Q9UIU6 781 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 BACE2Q9Y5Z0 518 aa6.68□□□□□ -1.34
CNOT1-204ENST00000563130 OAZ2O95190 189 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ADH1AP07327 375 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 CCNE1P24864 410 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 RPL13P26373 211 aaKnown RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 PPP1R2P41236 205 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 NDUFV1P49821 464 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 CREMQ03060 361 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 LRRC63Q05C16 580 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ENPEPQ07075 957 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ADAM9Q13443 819 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 PSMD5Q16401 504 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 DUOXA2Q1HG44 320 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 C1orf220Q5T0J3 134 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 LMBRD2Q68DH5 695 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ISM2Q6H9L7 571 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 SLC8B1Q6J4K2 584 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 SYCE2Q6PIF2 218 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 RSPO2Q6UXX9 243 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ANKS3Q6ZW76 656 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 CEP57Q86XR8 500 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 LRRC52Q8N7C0 313 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 SMRP1Q8NCR6 262 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 NOC3LQ8WTT2 800 aaKnown RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 CASP10Q92851 521 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 CCDC127Q96BQ5 260 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 DHTKD1Q96HY7 919 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ASB2Q96Q27 587 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 POP1Q99575 1024 aaKnown RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 CGRRF1Q99675 332 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 MKNK1Q9BUB5 465 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms