RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 AADACL2Q6P093 401 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 NOTUMQ6P988 496 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 CCNI2Q6ZMN8 369 aaPredicted RBP10.02□□□□□ -0.81
LINC00838-201ENST00000562956 MMS22LQ6ZRQ5 1243 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 KLHL7Q8IXQ5 586 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 KIF12Q96FN5 646 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 CARD9Q9H257 536 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 AVENQ9NQS1 362 aaPredicted RBP10.02□□□□□ -0.81
LINC00838-201ENST00000562956 DPP3Q9NY33 737 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 ADAM22Q9P0K1 906 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 ANAPC7Q9UJX3 599 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 AGAP1Q9UPQ3 857 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 C2CD2Q9Y426 696 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 DNAH12Q6ZR08 3092 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 KRIT1O00522 736 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 GLI1P08151 1106 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 PEX5P50542 639 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 ORC1Q13415 861 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 MFSD14CQ5VZR4 134 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 PHF13Q86YI8 300 aaPredicted RBP10.02□□□□□ -0.81
LINC00838-201ENST00000562956 TRIM11Q96F44 468 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 HPDLQ96IR7 371 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 RNPC3Q96LT9 517 aaKnown RBP10.02□□□□□ -0.81
LINC00838-201ENST00000562956 ZMAT2Q96NC0 199 aaKnown RBP10.02□□□□□ -0.81
LINC00838-201ENST00000562956 NXF3Q9H4D5 531 aaKnown RBP10.02□□□□□ -0.81
LINC00838-201ENST00000562956 RNF19AQ9NV58 838 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 STIM2Q9P246 746 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 HMGXB4Q9UGU5 601 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 TTC7AQ9ULT0 858 aaPredicted RBP10.02□□□□□ -0.81
LINC00838-201ENST00000562956 MIF4GDA9UHW6 222 aaKnown RBP10.01□□□□□ -0.81
LINC00838-201ENST00000562956 MCM3P25205 808 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 ATICP31939 592 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 GJA9P57773 515 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 GLE1Q53GS7 698 aaKnown RBP10.01□□□□□ -0.81
LINC00838-201ENST00000562956 CXCL17Q6UXB2 119 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 UBL4BQ8N7F7 174 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 WHAMMQ8TF30 809 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 SNX27Q96L92 541 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 ITGA11Q9UKX5 1188 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 PIN4Q9Y237 131 aaKnown RBP10.01□□□□□ -0.81
LINC00838-201ENST00000562956 NR2E1Q9Y466 385 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 ANK1P16157 1881 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 ZSCAN5CA6NGD5 496 aaPredicted RBP10.01□□□□□ -0.81
LINC00838-201ENST00000562956 ANKRD65E5RJM6 399 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 RAD51CO43502 376 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 ATP8B1O43520 1251 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 SPOPO43791 374 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 RAD23BP54727 409 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 TNNC1P63316 161 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 SLC20A2Q08357 652 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 MAMLD1Q13495 774 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 PCBP1Q15365 356 aaKnown RBP eCLIP10.01□□□□□ -0.81
LINC00838-201ENST00000562956 KCTD19Q17RG1 926 aaPredicted RBP10.01□□□□□ -0.81
LINC00838-201ENST00000562956 ADAT2Q7Z6V5 191 aaKnown RBP10.01□□□□□ -0.81
LINC00838-201ENST00000562956 WDTC1Q8N5D0 677 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 C1orf131Q8NDD1 294 aaKnown RBP10.01□□□□□ -0.81
LINC00838-201ENST00000562956 TWNKQ96RR1 684 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 WNT8AQ9H1J5 351 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 RASSF4Q9H2L5 321 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 VRTNQ9H8Y1 702 aa10.01□□□□□ -0.81
LINC00838-201ENST00000562956 MAP2K7O14733 419 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 GJB6O95452 261 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 ALDH1A1P00352 501 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 GNAT1P11488 350 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 MMP8P22894 467 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 AKAP5P24588 427 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 CTNNA1P35221 906 aaKnown RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 YWHAEP62258 255 aaKnown RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 RBP5P82980 135 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 C1QBPQ07021 282 aaKnown RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 CACNB2Q08289 660 aaPredicted RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 LIN9Q5TKA1 542 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 CD302Q8IX05 232 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 VCPIP1Q96JH7 1222 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 GDAP1L1Q96MZ0 367 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 APOL6Q9BWW8 343 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 DDX47Q9H0S4 455 aaKnown RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 PLEKHA5Q9HAU0 1116 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 HTTP42858 3142 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 MGAMO43451 1857 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 CILPO75339 1184 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 HEXIM1O94992 359 aaKnown RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 LSM8O95777 96 aaKnown RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 CD19P15391 556 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 OAS2P29728 719 aaKnown RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 LMAN1P49257 510 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 CRYBB1P53674 252 aaPredicted RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 SKIDA1Q1XH10 827 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 NBPF20Q3BBV1 942 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 GLRA4Q5JXX5 417 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 DAB2IPQ5VWQ8 1189 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 PLEKHA7Q6IQ23 1121 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 ALKAL1Q6UXT8 129 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 HDXQ7Z353 690 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 APBB1IPQ7Z5R6 666 aaPredicted RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 NT5DC4Q86YG4 428 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 SLC4A11Q8NBS3 891 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 C18orf25Q96B23 403 aaPredicted RBP10□□□□□ -0.81
LINC00838-201ENST00000562956 FAXDC2Q96IV6 333 aa10□□□□□ -0.81
LINC00838-201ENST00000562956 MTG1Q9BT17 334 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms