RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 MIOSQ9NXC5 875 aa14.89□□□□□ -0.03
CLK3-209ENST00000562670 NXF1Q9UBU9 619 aaKnown RBP14.89□□□□□ -0.03
CLK3-209ENST00000562670 ADAMTS1Q9UHI8 967 aa14.89□□□□□ -0.03
CLK3-209ENST00000562670 NAGPAQ9UK23 515 aa14.89□□□□□ -0.03
CLK3-209ENST00000562670 INTUQ9ULD6 942 aa14.89□□□□□ -0.03
CLK3-209ENST00000562670 BARX2Q9UMQ3 279 aaPredicted RBP14.89□□□□□ -0.03
CLK3-209ENST00000562670 POLIQ9UNA4 740 aa14.89□□□□□ -0.03
CLK3-209ENST00000562670 SCN1AP35498 2009 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 TDRD15B5MCY1 1934 aaKnown RBP14.88□□□□□ -0.03
CLK3-209ENST00000562670 ABHD14A-ACY1A0A1B0GW23 586 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 TRIM43BA6NCK2 446 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 KPNA7A9QM74 516 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 PODXLO00592 558 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 PJA2O43164 708 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 CLSTN1O94985 981 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 GZMAP12544 262 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 USP8P40818 1118 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 AFF1P51825 1210 aaKnown RBP14.88□□□□□ -0.03
CLK3-209ENST00000562670 LILRA4P59901 499 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 IKBKEQ14164 716 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 UPP1Q16831 310 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 TCTN1Q2MV58 587 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 SCARA5Q6ZMJ2 495 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 NYAP1Q6ZVC0 841 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 UNC93AQ86WB7 457 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 TMEM199Q8N511 208 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 RNF169Q8NCN4 708 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 TET1Q8NFU7 2136 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 LNX1Q8TBB1 728 aaPredicted RBP14.88□□□□□ -0.03
CLK3-209ENST00000562670 ELMO3Q96BJ8 720 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 TRIM43Q96BQ3 446 aaPredicted RBP14.88□□□□□ -0.03
CLK3-209ENST00000562670 MRPL9Q9BYD2 267 aaKnown RBP14.88□□□□□ -0.03
CLK3-209ENST00000562670 SDCBP2Q9H190 292 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 GOLGA2P5Q9HBQ8 144 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 PCDHB7Q9Y5E2 793 aa14.88□□□□□ -0.03
CLK3-209ENST00000562670 ARHGEF37A1IGU5 675 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 USP27XA6NNY8 438 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 BTNL10A8MVZ5 291 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 KIF2AO00139 706 aaPredicted RBP14.87□□□□□ -0.03
CLK3-209ENST00000562670 CAPN15O75808 1086 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 BAIAP3O94812 1187 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 RAG1P15918 1043 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 CHRNB2P17787 502 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 EN2P19622 333 aaPredicted RBP14.87□□□□□ -0.03
CLK3-209ENST00000562670 GNA15P30679 374 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 FMO1Q01740 532 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 GFPT1Q06210 699 aaPredicted RBP14.87□□□□□ -0.03
CLK3-209ENST00000562670 ALKBH5Q6P6C2 394 aaKnown RBP14.87□□□□□ -0.03
CLK3-209ENST00000562670 RPUSD2Q8IZ73 545 aaKnown RBP14.87□□□□□ -0.03
CLK3-209ENST00000562670 TMEM86AQ8N2M4 240 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 TMEM130Q8N3G9 435 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 SLC20A1Q8WUM9 679 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 DNAI2Q9GZS0 605 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 KIAA1257Q9ULG3 409 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 PCDHA13Q9Y5I0 950 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 SNX9Q9Y5X1 595 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 ALPK3Q96L96 1907 aa14.87□□□□□ -0.03
CLK3-209ENST00000562670 SPTLC1O15269 473 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 KRT86O43790 486 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 LSM8O95777 96 aaKnown RBP14.86□□□□□ -0.03
CLK3-209ENST00000562670 WEE2P0C1S8 567 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 CD58P19256 250 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 TNFAIP3P21580 790 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 ARHGAP25P42331 645 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 MAGEA1P43355 309 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 CLCNKBP51801 687 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 RAD23BP54727 409 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 STILQ15468 1287 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 SOWAHAQ2M3V2 549 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 KIAA1328Q86T90 577 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 GLYCTKQ8IVS8 523 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 ABI1Q8IZP0 508 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 C17orf53Q8N3J3 647 aaPredicted RBP14.86□□□□□ -0.03
CLK3-209ENST00000562670 WHAMMQ8TF30 809 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.86□□□□□ -0.03
CLK3-209ENST00000562670 ISCUQ9H1K1 167 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 TBC1D13Q9NVG8 400 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 MYO1AQ9UBC5 1043 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 LRFN2Q9ULH4 789 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 PCDHGC3Q9UN70 934 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 INPP5FQ9Y2H2 1132 aa14.86□□□□□ -0.03
CLK3-209ENST00000562670 TSC2P49815 1807 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 COL4A6Q14031 1691 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 MED7O43513 233 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 HUS1O60921 280 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 POMCP01189 267 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 FGFR1P11362 822 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 WARSP23381 471 aaKnown RBP14.85□□□□□ -0.03
CLK3-209ENST00000562670 ITGB8P26012 769 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 CDH5P33151 784 aaPredicted RBP14.85□□□□□ -0.03
CLK3-209ENST00000562670 RAP1GAPP47736 663 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 CYP27A1Q02318 531 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 KIF5AQ12840 1032 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 ARHGAP29Q52LW3 1261 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 DEFB128Q7Z7B8 93 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 GPIHBP1Q8IV16 184 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 COLGALT2Q8IYK4 626 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 SLC4A11Q8NBS3 891 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 APPL2Q8NEU8 664 aa14.85□□□□□ -0.03
CLK3-209ENST00000562670 KBTBD7Q8WVZ9 684 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms