RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CGRRF1Q99675 332 aa16.59■□□□□ 0.25
CCNDBP1-203ENST00000562553 PRKD2Q9BZL6 878 aa16.59■□□□□ 0.25
CCNDBP1-203ENST00000562553 ITGA11Q9UKX5 1188 aa16.59■□□□□ 0.25
CCNDBP1-203ENST00000562553 KPNA7A9QM74 516 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 CYB561D2O14569 222 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 CCL16O15467 120 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 SEC24AO95486 1093 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 NR3C1P04150 777 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 CYP11A1P05108 521 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 KRT19P08727 400 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 PAX3P23760 479 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 BFSP1Q12934 665 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 SV2CQ496J9 727 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 PPM1LQ5SGD2 360 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 WSCD1Q658N2 575 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 OVOS1Q6IE37 1185 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 CCDC149Q6ZUS6 474 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 RNF135Q8IUD6 432 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 WDR49Q8IV35 697 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 SLC9A9Q8IVB4 645 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 GUF1Q8N442 669 aaKnown RBP16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 ZNF461Q8TAF7 563 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 RHOBTB2Q9BYZ6 727 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 TRAF3IP3Q9Y228 551 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 PCDHA5Q9Y5H7 936 aa16.58■□□□□ 0.24
CCNDBP1-203ENST00000562553 CLUHO75153 1309 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 VNN2O95498 520 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 TNNC2P02585 160 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 HNRNPA1P09651 372 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 CPB1P15086 417 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 HOXD11P31277 338 aaPredicted RBP16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 PNPLA4P41247 253 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 RBP5P82980 135 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 DUOXA2Q1HG44 320 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 CYP26C1Q6V0L0 522 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 RNF19BQ6ZMZ0 732 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 LRRC52Q8N7C0 313 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 OR10T2Q8NGX3 314 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 SPATA20Q8TB22 786 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 TMEM174Q8WUU8 243 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 ZNF516Q92618 1163 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 FNBP1Q96RU3 617 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 RTP3Q9BQQ7 232 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 PIDD1Q9HB75 910 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 WDR6Q9NNW5 1121 aaKnown RBP16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 MUTYHQ9UIF7 546 aa16.57■□□□□ 0.24
CCNDBP1-203ENST00000562553 OR6C75A6NL08 312 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 CALUO43852 315 aaPredicted RBP16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 KINO60870 393 aaKnown RBP16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 N4BP1O75113 896 aaKnown RBP16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 KIF20AO95235 890 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 ATF2P15336 505 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 TNNI1P19237 187 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 HOXA9P31269 272 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 NTHL1P78549 312 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 ADCY1Q08828 1119 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 UVSSAQ2YD98 709 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 ZCWPW2Q504Y3 356 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 TPGS2Q68CL5 300 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 TRAPPC11Q7Z392 1133 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 TDRD5Q8NAT2 981 aaKnown RBP16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 SMARCE1Q969G3 411 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 PGLYRP2Q96PD5 576 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 GSDMAQ96QA5 445 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 KCNH6Q9H252 994 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 CYP4F11Q9HBI6 524 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 RMND1Q9NWS8 449 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 HCFC1R1Q9NWW0 138 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 AFF4Q9UHB7 1163 aaKnown RBP16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 L1RE1Q9UN81 338 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 NR2E1Q9Y466 385 aa16.56■□□□□ 0.24
CCNDBP1-203ENST00000562553 MUC6Q6W4X9 2439 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 ARHGEF37A1IGU5 675 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 LRRIQ3A6PVS8 624 aaPredicted RBP16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 PRRG1O14668 218 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 SMC2O95347 1197 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 ELF1P32519 619 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 PRCPP42785 496 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 CDR1P51861 262 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 ZNF658Q5TYW1 1059 aaPredicted RBP16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 CEP135Q66GS9 1140 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 GRASPQ7Z6J2 395 aaPredicted RBP16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 ELOA2Q8IYF1 753 aaPredicted RBP16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 TCEAL8Q8IYN2 117 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 PDCL2Q8N4E4 241 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 PARD3BQ8TEW8 1205 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 EDAQ92838 391 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 CRISPLD1Q9H336 500 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 DSEQ9UL01 958 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 POLIQ9UNA4 740 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 INSL5Q9Y5Q6 135 aa16.55■□□□□ 0.24
CCNDBP1-203ENST00000562553 ZNF318Q5VUA4 2279 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 TECTAO75443 2155 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 PRPF40AO75400 957 aaKnown RBP16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 CST3P01034 146 aaPredicted RBP16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 NR2F2P24468 414 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 UBE2HP62256 183 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 DLG4P78352 724 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 GPR17Q13304 367 aa16.54■□□□□ 0.24
CCNDBP1-203ENST00000562553 MYBPC2Q14324 1141 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms