RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 MIGA2Q7L4E1 593 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 PTF1AQ7RTS3 328 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 CYP2U1Q7Z449 544 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 NT5DC3Q86UY8 548 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 JAMLQ86YT9 394 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 TREML1Q86YW5 311 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 LSMEM2Q8N112 164 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 CACTIN-AS1Q8N1I8 211 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 ENAHQ8N8S7 591 aaPredicted RBP7.67□□□□□ -1.18
CDH1-203ENST00000561751 TERB1Q8NA31 727 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 C12orf50Q8NA57 414 aaPredicted RBP7.67□□□□□ -1.18
CDH1-203ENST00000561751 BBOF1Q8ND07 529 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 OR6Y1Q8NGX8 325 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 CCDC110Q8TBZ0 833 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 FAM172AQ8WUF8 416 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 RAPGEF4Q8WZA2 1011 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 STARD8Q92502 1023 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 ZNF75CPQ92670 426 aaPredicted RBP7.67□□□□□ -1.18
CDH1-203ENST00000561751 BORCS5Q969J3 196 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 NLRP4Q96MN2 994 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 HAUS8Q9BT25 410 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 TDRD1Q9BXT4 1180 aaKnown RBP7.67□□□□□ -1.18
CDH1-203ENST00000561751 OSBPL8Q9BZF1 889 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 OSBPL6Q9BZF3 934 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 KLHL4Q9C0H6 718 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 GBA3Q9H227 469 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 SEMA4AQ9H3S1 761 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 RETREG1Q9H6L5 497 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 PICK1Q9NRD5 415 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 TBC1D23Q9NUY8 699 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 BIN2Q9UBW5 565 aaPredicted RBP7.67□□□□□ -1.18
CDH1-203ENST00000561751 FETUBQ9UGM5 382 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 ARMCX3Q9UH62 379 aaPredicted RBP7.67□□□□□ -1.18
CDH1-203ENST00000561751 ZNF180Q9UJW8 692 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 DSEQ9UL01 958 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 PHTF1Q9UMS5 762 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 STX8Q9UNK0 236 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 FAF1Q9UNN5 650 aaPredicted RBP7.67□□□□□ -1.18
CDH1-203ENST00000561751 EXOC7Q9UPT5 735 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 TRAF3IP3Q9Y228 551 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 ZNF652Q9Y2D9 606 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 GDAQ9Y2T3 454 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 ZNF711Q9Y462 761 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 PCDHA3Q9Y5H8 950 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 RTL9Q8NET4 1388 aa7.67□□□□□ -1.18
CDH1-203ENST00000561751 RGPD5Q99666 1765 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 EIF3FO00303 357 aaPredicted RBP7.66□□□□□ -1.18
CDH1-203ENST00000561751 TIMM44O43615 452 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 BUD23O43709 281 aaKnown RBP7.66□□□□□ -1.18
CDH1-203ENST00000561751 RNASEH1O60930 286 aaKnown RBP7.66□□□□□ -1.18
CDH1-203ENST00000561751 TM7SF2O76062 418 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 HAUS5O94927 633 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 TTC4O95801 387 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 TFAP2AP05549 437 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 CD48P09326 243 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 UBTFL6P0CB48 400 aaPredicted RBP7.66□□□□□ -1.18
CDH1-203ENST00000561751 GSTT2P0CG29 244 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 GSTT2BP0CG30 244 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 MYBL1P10243 752 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 RXRAP19793 462 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 CALML3P27482 149 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 PHKA2P46019 1235 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 BCAP31P51572 246 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 ATP6V0D1P61421 351 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 PTSQ03393 145 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 KLHL30Q0D2K2 578 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 CDC16Q13042 620 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 RRP1BQ14684 758 aaKnown RBP7.66□□□□□ -1.18
CDH1-203ENST00000561751 ASIC2Q16515 512 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.18
CDH1-203ENST00000561751 ZC2HC1CQ53FD0 456 aaPredicted RBP7.66□□□□□ -1.18
CDH1-203ENST00000561751 HERC4Q5GLZ8 1057 aaPredicted RBP7.66□□□□□ -1.18
CDH1-203ENST00000561751 TCERG1LQ5VWI1 586 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 SNRNP48Q6IEG0 339 aaKnown RBP7.66□□□□□ -1.18
CDH1-203ENST00000561751 CCDC62Q6P9F0 684 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 DSTYKQ6XUX3 929 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 LINC00299Q6ZSB3 139 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 ZBTB33Q86T24 672 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 C11orf74Q86VG3 221 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 RASSF3Q86WH2 238 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 LRRC6Q86X45 466 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 DZIP1Q86YF9 867 aaKnown RBP7.66□□□□□ -1.18
CDH1-203ENST00000561751 C4orf32Q8N8J7 132 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 FANCBQ8NB91 859 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 ADAM32Q8TC27 787 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 CHPT1Q8WUD6 406 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 NACC2Q96BF6 587 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 SNF8Q96H20 258 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 TSG101Q99816 390 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 OSBPL10Q9BXB5 764 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 IMPG2Q9BZV3 1241 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 DRC3Q9H069 523 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 KLC2Q9H0B6 622 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 C10orf88Q9H8K7 445 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 MMRN2Q9H8L6 949 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 TRPC7Q9HCX4 862 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 SH3GLB2Q9NR46 395 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 VPS45Q9NRW7 570 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 PGPEP1Q9NXJ5 209 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 ARHGEF38Q9NXL2 777 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms