RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 CYFIP2Q96F07 1278 aa10.9□□□□□ -0.67
TUBGCP4-202ENST00000561691 APBA2Q99767 749 aa10.9□□□□□ -0.67
TUBGCP4-202ENST00000561691 CAPS2Q9BXY5 557 aa10.9□□□□□ -0.67
TUBGCP4-202ENST00000561691 SDCBP2Q9H190 292 aa10.9□□□□□ -0.67
TUBGCP4-202ENST00000561691 KLC4Q9NSK0 619 aa10.9□□□□□ -0.67
TUBGCP4-202ENST00000561691 ETAA1Q9NY74 926 aa10.9□□□□□ -0.67
TUBGCP4-202ENST00000561691 RRN3P2A6NIE6 340 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 IL18RAPO95256 599 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 GGCXP38435 758 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 MFSD10Q14728 455 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 KIZQ2M2Z5 673 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 SGSM1Q2NKQ1 1148 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 TMEM270Q6UE05 265 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 OTUD6BQ8N6M0 293 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 RIN2Q8WYP3 895 aaPredicted RBP10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 BTBD6Q96KE9 485 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 BCO2Q9BYV7 579 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 TRIM7Q9C029 511 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 ARHGAP39Q9C0H5 1083 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 NIF3L1Q9GZT8 377 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 AVENQ9NQS1 362 aaPredicted RBP10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 CTTNBP2NLQ9P2B4 639 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 AMFRQ9UKV5 643 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 Q9Y3F1 56 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 NR2E1Q9Y466 385 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 PCDHB4Q9Y5E5 795 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 MROH7Q68CQ1 1323 aa10.89□□□□□ -0.67
TUBGCP4-202ENST00000561691 SMIM35A0A1B0GVV1 85 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 TCRBV5S1A1TA0A578 114 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 GOLGA6CA6NDK9 693 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 MYADML2A6NDP7 307 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ZEB2O60315 1214 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 KIAA0754O94854 1291 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 GOLGA6DP0CG33 693 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ITGA4P13612 1032 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 TMOD1P28289 359 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 RGS2P41220 211 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 PAFAH1B1P43034 410 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 PSEN2P49810 448 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 BPIFB4P59827 614 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 RNASE9P60153 205 aaKnown RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 GNGT1P63211 74 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 SKOR1P84550 965 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ZNF200P98182 395 aaPredicted RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 TFAMQ00059 246 aaKnown RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 JADE1Q6IE81 842 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ZDHHC14Q8IZN3 488 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 WHAMMQ8TF30 809 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 CPA5Q8WXQ8 436 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 TFAP2BQ92481 460 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ZNF653Q96CK0 615 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 RPS6KC1Q96S38 1066 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.88□□□□□ -0.673e-6■■■■■ 30.2
TUBGCP4-202ENST00000561691 NUP85Q9BW27 656 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 RPF1Q9H9Y2 349 aaKnown RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 CISHQ9NSE2 258 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 GOLGA6AQ9NYA3 693 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 DDX20Q9UHI6 824 aaKnown RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 POLIQ9UNA4 740 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 NOC2LQ9Y3T9 749 aaKnown RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 NRCAMQ92823 1304 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 CEP104O60308 925 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 GLI1P08151 1106 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 COMTP21964 271 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 RRM1P23921 792 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 MCM3P25205 808 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 TNFRSF8P28908 595 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 GNA15P30679 374 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 CLNS1AP54105 237 aaKnown RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 BEX3Q00994 111 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 SLC7A5Q01650 507 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ACTN3Q08043 901 aaPredicted RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 CCDC181Q5TID7 509 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 NAA35Q5VZE5 725 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 AP1ARQ63HQ0 302 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 PHF13Q86YI8 300 aaPredicted RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 GSPT2Q8IYD1 628 aaKnown RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 WDTC1Q8N5D0 677 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ARMC2Q8NEN0 867 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ZNF564Q8TBZ8 553 aaPredicted RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 AENQ8WTP8 325 aaKnown RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 TMEM40Q8WWA1 233 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 SOCS4Q8WXH5 440 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 RUBCNQ92622 972 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 TAF4BQ92750 862 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 FAM210AQ96ND0 272 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 SH3GL3Q99963 347 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 HINFPQ9BQA5 517 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 CARD9Q9H257 536 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ASB7Q9H672 318 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 VRTNQ9H8Y1 702 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ZFYVE28Q9HCC9 887 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 GDF3Q9NR23 364 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 UVRAGQ9P2Y5 699 aa10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 CNOT8Q9UFF9 292 aaKnown RBP10.88□□□□□ -0.67
TUBGCP4-202ENST00000561691 ZSCAN5CA6NGD5 496 aaPredicted RBP10.87□□□□□ -0.67
TUBGCP4-202ENST00000561691 CA12O43570 354 aa10.87□□□□□ -0.67
TUBGCP4-202ENST00000561691 WEE2P0C1S8 567 aa10.87□□□□□ -0.67
TUBGCP4-202ENST00000561691 CTNNA2P26232 953 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms