RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 VNN2O95498 520 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 DLATP10515 647 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 ODC1P11926 461 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 PNPLA4P41247 253 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 SV2CQ496J9 727 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 C1orf220Q5T0J3 134 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 WSCD1Q658N2 575 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 OVOS1Q6IE37 1185 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 CYP26C1Q6V0L0 522 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 LIMS2Q7Z4I7 341 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 ADSSL1Q8N142 457 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 KHSRPQ92945 711 aaKnown RBP eCLIP16.46■□□□□ 0.239e-7■■■□□ 16.5
SNRPA1-213ENST00000560856 RIPOR3Q96MK2 946 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 ZNF560Q96MR9 790 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 NECTIN4Q96NY8 510 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 PRKD2Q9BZL6 878 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 GDAP2Q9NXN4 497 aa16.46■□□□□ 0.23
SNRPA1-213ENST00000560856 C2orf16Q68DN1 1984 aa16.46■□□□□ 0.22
SNRPA1-213ENST00000560856 LRRIQ3A6PVS8 624 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 TNFRSF10AO00220 468 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 TULP1O00294 542 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 MAPK13O15264 365 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 AKAP3O75969 853 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 SEC24AO95486 1093 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 TNNC2P02585 160 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 C8AP07357 584 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 ATF2P15336 505 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 CD44P16070 742 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 TNNI1P19237 187 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 NR2F2P24468 414 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 HOXA9P31269 272 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 UVSSAQ2YD98 709 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 EDRF1Q3B7T1 1238 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 TPGS2Q68CL5 300 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 ELMSAN1Q6PJG2 1045 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 RTL10Q7L3V2 364 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 USP37Q86T82 979 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 ZC3H3Q8IXZ2 948 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 TCEAL8Q8IYN2 117 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 OR10T2Q8NGX3 314 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 TMC2Q8TDI7 906 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 FNBP1Q96RU3 617 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 TMEM209Q96SK2 561 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 OXCT2Q9BYC2 517 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 LMBRD1Q9NUN5 540 aa16.45■□□□□ 0.22
SNRPA1-213ENST00000560856 OR6C75A6NL08 312 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 C4BPAP04003 597 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 KRT19P08727 400 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 POU2F2P09086 479 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 HNRNPA1P09651 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 OR4Q2P0C623 313 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 PMS1P54277 932 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 ARPP19P56211 112 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 DLG4P78352 724 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 BFSP1Q12934 665 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 MORC3Q14149 939 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 CEP135Q66GS9 1140 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 ISM2Q6H9L7 571 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 RNF19BQ6ZMZ0 732 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 SLC7A14Q8TBB6 771 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 SMG7Q92540 1137 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 GTPBP4Q9BZE4 634 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 AFF4Q9UHB7 1163 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 DSEQ9UL01 958 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 L1RE1Q9UN81 338 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 TSC2P49815 1807 aa16.44■□□□□ 0.22
SNRPA1-213ENST00000560856 ARHGEF37A1IGU5 675 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 PPP1R3GB7ZBB8 358 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 GPR17Q13304 367 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 ADAM9Q13443 819 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 PPM1LQ5SGD2 360 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 LIN9Q5TKA1 542 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 TDRD10Q5VZ19 366 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 ANKRD40Q6AI12 368 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 PDCL2Q8N4E4 241 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 HPDLQ96IR7 371 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 RPGRIP1Q96KN7 1286 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 XYLT2Q9H1B5 865 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 CRISPLD1Q9H336 500 aa16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 WDR6Q9NNW5 1121 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-213ENST00000560856 DENND4AQ7Z401 1863 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 NOTCH4Q99466 2003 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 SPDYE4A6NLX3 237 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 GABRDO14764 452 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 N4BP1O75113 896 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 VNN1O95497 513 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 RPL13P26373 211 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 SSTR3P32745 418 aaPredicted RBP16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 SOWAHAQ2M3V2 549 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 CCDC149Q6ZUS6 474 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 LRRTM3Q86VH5 581 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 TOP6BLQ8N6T0 577 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 EEF2KMTQ96G04 330 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 ZCWPW1Q9H0M4 648 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 MAFFQ9ULX9 164 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 USTQ9Y2C2 406 aa16.42■□□□□ 0.22
SNRPA1-213ENST00000560856 FRMD4BQ9Y2L6 1034 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms