RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FSTL4Q6MZW2 842 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 TAS1R3Q7RTX0 852 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 TTC9BQ8N6N2 239 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 FAM200AQ8TCP9 573 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 DDX12PQ92771 950 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 TBC1D32Q96NH3 1257 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 PGLYRP2Q96PD5 576 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 HHIPQ96QV1 700 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 TMEM60Q9H2L4 133 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 POLD4Q9HCU8 107 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 PTPRHQ9HD43 1115 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 SLC38A7Q9NVC3 462 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 CNTN3Q9P232 1028 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 MAFFQ9ULX9 164 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 TNFSF13BQ9Y275 285 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 ATG2BQ96BY7 2078 aa10.85□□□□□ -0.67
TPM1-225ENST00000560679 NUP205Q92621 2012 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 IGSF10Q6WRI0 2623 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 BCLAF3A2AJT9 711 aaKnown RBP10.84□□□□□ -0.67
TPM1-225ENST00000560679 TMEM8BA6NDV4 472 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 OTOL1A6NHN0 477 aaPredicted RBP10.84□□□□□ -0.67
TPM1-225ENST00000560679 DCLK1O15075 740 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 CTDNEP1O95476 244 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 MCM4P33991 863 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 TXKP42681 527 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 DUSP4Q13115 394 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 ZNF568Q3ZCX4 644 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 CPLX2Q6PUV4 134 aaKnown RBP10.84□□□□□ -0.67
TPM1-225ENST00000560679 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 ZCCHC14Q8WYQ9 949 aaKnown RBP10.84□□□□□ -0.67
TPM1-225ENST00000560679 TMEM209Q96SK2 561 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 ACO2Q99798 780 aaKnown RBP10.84□□□□□ -0.67
TPM1-225ENST00000560679 POLR3CQ9BUI4 534 aaPredicted RBP10.84□□□□□ -0.67
TPM1-225ENST00000560679 SCNM1Q9BWG6 230 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 TUFT1Q9NNX1 390 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 HPS4Q9NQG7 708 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 TOPORSQ9NS56 1045 aaPredicted RBP10.84□□□□□ -0.67
TPM1-225ENST00000560679 OBP2AQ9NY56 170 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 TUBGCP4Q9UGJ1 667 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 PCDHB8Q9UN66 801 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 NUB1Q9Y5A7 615 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 PHLPP2Q6ZVD8 1323 aa10.84□□□□□ -0.67
TPM1-225ENST00000560679 SOBPA7XYQ1 873 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 RNF40O75150 1001 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 SOAT2O75908 522 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 EGFP01133 1207 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 PROZP22891 400 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 RPL9P32969 192 aaKnown RBP10.83□□□□□ -0.68
TPM1-225ENST00000560679 KRT2P35908 639 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 EFNA5P52803 228 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 YARSP54577 528 aaKnown RBP10.83□□□□□ -0.68
TPM1-225ENST00000560679 CYP4F8P98187 520 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 PPP2R5AQ15172 486 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 GPR158Q5T848 1215 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 NAIF1Q69YI7 327 aaPredicted RBP10.83□□□□□ -0.68
TPM1-225ENST00000560679 LRSAM1Q6UWE0 723 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 APPL2Q8NEU8 664 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 RIN3Q8TB24 985 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 BPIFB1Q8TDL5 484 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 PSMG2Q969U7 264 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 CCDC94Q9BW85 323 aaPredicted RBP10.83□□□□□ -0.68
TPM1-225ENST00000560679 SMG9Q9H0W8 520 aaKnown RBP10.83□□□□□ -0.68
TPM1-225ENST00000560679 UPF2Q9HAU5 1272 aaKnown RBP10.83□□□□□ -0.68
TPM1-225ENST00000560679 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 TIMM13Q9Y5L4 95 aaPredicted RBP10.83□□□□□ -0.68
TPM1-225ENST00000560679 OBSL1O75147 1896 aa10.83□□□□□ -0.68
TPM1-225ENST00000560679 MTMR11A4FU01 709 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 ARHGEF35A5YM69 484 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 M0QZQ0 153 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 CDX4O14627 284 aaPredicted RBP10.82□□□□□ -0.68
TPM1-225ENST00000560679 CDKL5O76039 1030 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 OAZ2O95190 189 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 CAVIN2O95810 425 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 XBP1P17861 261 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 GABRR2P28476 465 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 WEE1P30291 646 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 MCM2P49736 904 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 EPHB3P54753 998 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 CREB5Q02930 508 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 PLD1Q13393 1074 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 ECM1Q16610 540 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 ITPRIPL2Q3MIP1 535 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 TRIM68Q6AZZ1 485 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 CENPPQ6IPU0 288 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 KIAA1211LQ6NV74 962 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 HAUS6Q7Z4H7 955 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 CAMKK1Q8N5S9 505 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 ATAD1Q8NBU5 361 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 EZH1Q92800 747 aaPredicted RBP10.82□□□□□ -0.68
TPM1-225ENST00000560679 NACC1Q96RE7 527 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 FAM83CQ9BQN1 747 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 TARS2Q9BW92 718 aaKnown RBP10.82□□□□□ -0.68
TPM1-225ENST00000560679 ATXN3LQ9H3M9 355 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 IL21Q9HBE4 155 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 FBRSL1Q9HCM7 1045 aaKnown RBP10.82□□□□□ -0.68
TPM1-225ENST00000560679 SLC8A2Q9UPR5 921 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 SLC27A5Q9Y2P5 690 aa10.82□□□□□ -0.68
TPM1-225ENST00000560679 DENND4CQ5VZ89 1909 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms