RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ASRGL1Q7L266 308 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 NLRX1Q86UT6 975 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 ALYREFQ86V81 257 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 VSIG10LQ86VR7 867 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 VSIG1Q86XK7 387 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 ENDOVQ8N8Q3 282 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CCDC89Q8N998 374 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 SYT2Q8N9I0 419 aaPredicted RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 SLC30A5Q8TAD4 765 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 AGAP11Q8TF27 550 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 TMEM174Q8WUU8 243 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 KIFAP3Q92845 792 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 ARHGEF2Q92974 986 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 GPRASP2Q96D09 838 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 STAMBPL1Q96FJ0 436 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 BICD1Q96G01 975 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 SNF8Q96H20 258 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CFAP57Q96MR6 1250 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 HINFPQ9BQA5 517 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 ZSWIM1Q9BR11 485 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 POLR3CQ9BUI4 534 aaPredicted RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 TRAIPQ9BWF2 469 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CCDC113Q9H0I3 377 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 LRRC19Q9H756 370 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 DCLRE1BQ9H816 532 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 RNPEPL1Q9HAU8 725 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 SSU72Q9NP77 194 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 TBC1D22BQ9NU19 505 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CYP39A1Q9NYL5 469 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 SCOCQ9UIL1 159 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 PACSIN2Q9UNF0 486 aaPredicted RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 PCDHB13Q9Y5F0 798 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 SMAPO00193 183 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 TRAFD1O14545 582 aaPredicted RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 PMM2O15305 246 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 MAGEB2O15479 319 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 PSMD10O75832 226 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 UBOX5O94941 541 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 TROVE2P10155 538 aaKnown RBP eCLIP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 MYBL1P10243 752 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 TAL1P17542 331 aaPredicted RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 ALDH5A1P51649 535 aaPredicted RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 POLGP54098 1239 aaPredicted RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 ENPEPQ07075 957 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 SPIRE1Q08AE8 756 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 AUHQ13825 339 aaKnown RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 SPARCL1Q14515 664 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 KPNB1Q14974 876 aaKnown RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 DCAF17Q5H9S7 520 aaPredicted RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 SH2D4BQ5SQS7 431 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 C6orf163Q5TEZ5 329 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 NUGGCQ68CJ6 796 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 PHLDB3Q6NSJ2 640 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 MAMDC4Q6UXC1 1216 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 SLC30A10Q6XR72 485 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 EPM2AIP1Q7L775 607 aaPredicted RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 ZNF467Q7Z7K2 595 aaPredicted RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 DDX42Q86XP3 938 aaKnown RBP eCLIP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 FAM186BQ8IYM0 893 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 RDM1Q8NG50 284 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 PIGOQ8TEQ8 1089 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 ZNF483Q8TF39 744 aaPredicted RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 DIS3LQ8TF46 1054 aaKnown RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 STK32AQ8WU08 396 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 THOC1Q96FV9 657 aaKnown RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 EEF2KMTQ96G04 330 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 LRRC37BQ96QE4 947 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 TAAR1Q96RJ0 339 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 TGS1Q96RS0 853 aaKnown RBP9.07□□□□□ -0.96
CCDC33-209ENST00000560565 TEKT3Q9BXF9 490 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 OSBPL1AQ9BXW6 950 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 PACSIN1Q9BY11 444 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 PITPNM3Q9BZ71 974 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 NEUROG2Q9H2A3 272 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 VCX3BQ9H321 246 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 C11orf49Q9H6J7 331 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 TUFT1Q9NNX1 390 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 VCX3AQ9NNX9 186 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 ETAA1Q9NY74 926 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 IL1RAPL1Q9NZN1 696 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 COL20A1Q9P218 1284 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 PDP2Q9P2J9 529 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 APEX2Q9UBZ4 518 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 VAV3Q9UKW4 847 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 KIAA1024Q9UPX6 916 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 FRMPD3Q5JV73 1810 aa9.07□□□□□ -0.96
CCDC33-209ENST00000560565 TMEM120BA0PK00 339 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 ANKRD33BA6NCL7 494 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 A6NHS1 94 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 POTEMA6NI47 508 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 ENO4A6NNW6 628 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 TCP11X1B4DZS4 312 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 IPO5O00410 1097 aaKnown RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 DDX3XO00571 662 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 GAS7O60861 476 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 SMIM24O75264 130 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 NR3C2P08235 984 aa9.06□□□□□ -0.96
CCDC33-209ENST00000560565 MAPTP10636 758 aaKnown RBP9.06□□□□□ -0.96
CCDC33-209ENST00000560565 ABCD1P33897 745 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms