RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 CXCL16Q9H2A7 254 aa24■■□□□ 1.43
PBX1-218ENST00000560469 AVENQ9NQS1 362 aaPredicted RBP24■■□□□ 1.43
PBX1-218ENST00000560469 STXBP5LQ9Y2K9 1186 aa24■■□□□ 1.43
PBX1-218ENST00000560469 SMIM28A0A1B0GU29 152 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 MED7O43513 233 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 CAND2O75155 1236 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 ZNF394Q53GI3 561 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 FAM26DQ5JW98 314 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 NT5DC3Q86UY8 548 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 TMEM130Q8N3G9 435 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 COG1Q8WTW3 980 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 CPA5Q8WXQ8 436 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 MMS19Q96T76 1030 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 SDCBP2Q9H190 292 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 RNF39Q9H2S5 420 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 SMYD3Q9H7B4 428 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 CNOT8Q9UFF9 292 aaKnown RBP23.99■■□□□ 1.43
PBX1-218ENST00000560469 PCDHGC3Q9UN70 934 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 PTCH2Q9Y6C5 1203 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 ATF7P17544 494 aaPredicted RBP23.99■■□□□ 1.43
PBX1-218ENST00000560469 CYP3A5P20815 502 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 PAFAH1B1P43034 410 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 RAP1GAPP47736 663 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 CDH8P55286 799 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 CCDC181Q5TID7 509 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 ZNF572Q7Z3I7 529 aaPredicted RBP23.99■■□□□ 1.43
PBX1-218ENST00000560469 PHF13Q86YI8 300 aaPredicted RBP23.99■■□□□ 1.43
PBX1-218ENST00000560469 ZNF518BQ9C0D4 1074 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 TUBGCP4Q9UGJ1 667 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 TRIM17Q9Y577 477 aa23.99■■□□□ 1.43
PBX1-218ENST00000560469 FRMPD3Q5JV73 1810 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 FAM170AA1A519 330 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 CILPO75339 1184 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 ZSCAN20P17040 1043 aaPredicted RBP23.98■■□□□ 1.43
PBX1-218ENST00000560469 BRD2P25440 801 aaKnown RBP23.98■■□□□ 1.43
PBX1-218ENST00000560469 TRIM71Q2Q1W2 868 aaKnown RBP23.98■■□□□ 1.43
PBX1-218ENST00000560469 GLRA4Q5JXX5 417 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 FBXO47Q5MNV8 452 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 LIN9Q5TKA1 542 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 MON1BQ7L1V2 547 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 GPR161Q8N6U8 529 aaKnown RBP23.98■■□□□ 1.43
PBX1-218ENST00000560469 ZNF564Q8TBZ8 553 aaPredicted RBP23.98■■□□□ 1.43
PBX1-218ENST00000560469 C18orf25Q96B23 403 aaPredicted RBP23.98■■□□□ 1.43
PBX1-218ENST00000560469 PBKQ96KB5 322 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 PSMB7Q99436 277 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 NUP85Q9BW27 656 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 GOLPH3Q9H4A6 298 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 ERVK-5Q9HDB9 667 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 TRMT13Q9NUP7 481 aaKnown RBP23.98■■□□□ 1.43
PBX1-218ENST00000560469 FAM105AQ9NUU6 356 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 KLK14Q9P0G3 267 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 PACSIN2Q9UNF0 486 aaPredicted RBP23.98■■□□□ 1.43
PBX1-218ENST00000560469 SQORQ9Y6N5 450 aa23.98■■□□□ 1.43
PBX1-218ENST00000560469 CFHP08603 1231 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 CXCR5P32302 372 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 RAD23BP54727 409 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 ITIH3Q06033 890 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 INCA1Q0VD86 236 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 C9orf57Q5W0N0 161 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 PASD1Q8IV76 773 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 TMEM35BQ8NCS4 154 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 HES6Q96HZ4 224 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 BARX2Q9UMQ3 279 aaPredicted RBP23.97■■□□□ 1.43
PBX1-218ENST00000560469 CEP83Q9Y592 693 aa23.97■■□□□ 1.43
PBX1-218ENST00000560469 ATMINO43313 823 aaPredicted RBP23.96■■□□□ 1.43
PBX1-218ENST00000560469 C1QBPQ07021 282 aaKnown RBP23.96■■□□□ 1.43
PBX1-218ENST00000560469 CFAP221Q4G0U5 840 aa23.96■■□□□ 1.43
PBX1-218ENST00000560469 USP38Q8NB14 1042 aa23.96■■□□□ 1.43
PBX1-218ENST00000560469 SLC43A3Q8NBI5 491 aa23.96■■□□□ 1.43
PBX1-218ENST00000560469 WHAMMQ8TF30 809 aa23.96■■□□□ 1.43
PBX1-218ENST00000560469 TMEM176AQ96HP8 235 aa23.96■■□□□ 1.43
PBX1-218ENST00000560469 ZNF560Q96MR9 790 aa23.96■■□□□ 1.43
PBX1-218ENST00000560469 AGO3Q9H9G7 860 aaKnown RBP23.96■■□□□ 1.43
PBX1-218ENST00000560469 ADAM22Q9P0K1 906 aa23.96■■□□□ 1.43
PBX1-218ENST00000560469 A0A1W2PQ45 241 aaPredicted RBP23.95■■□□□ 1.43
PBX1-218ENST00000560469 A0A1W2PQY0 241 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 ITGA4P13612 1032 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 CD19P15391 556 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 CDH5P33151 784 aaPredicted RBP23.95■■□□□ 1.43
PBX1-218ENST00000560469 PNPLA4P41247 253 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 PAK2Q13177 524 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 SLC4A11Q8NBS3 891 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 RPS6KC1Q96S38 1066 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 SELENOOQ9BVL4 669 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 SEZ6LQ9BYH1 1024 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.95■■□□□ 1.43
PBX1-218ENST00000560469 STARD7Q9NQZ5 370 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 PADI3Q9ULW8 664 aa23.95■■□□□ 1.43
PBX1-218ENST00000560469 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.95■■□□□ 1.43
PBX1-218ENST00000560469 A0A0U1RQG5 324 aaPredicted RBP23.95■■□□□ 1.42
PBX1-218ENST00000560469 PDE2AO00408 941 aaPredicted RBP23.95■■□□□ 1.42
PBX1-218ENST00000560469 PIRO00625 290 aa23.95■■□□□ 1.42
PBX1-218ENST00000560469 KCNK3O14649 394 aa23.95■■□□□ 1.42
PBX1-218ENST00000560469 RAB27AP51159 221 aa23.95■■□□□ 1.42
PBX1-218ENST00000560469 TFAP2BQ92481 460 aa23.95■■□□□ 1.42
PBX1-218ENST00000560469 ZSWIM1Q9BR11 485 aa23.95■■□□□ 1.42
PBX1-218ENST00000560469 BEGAINQ9BUH8 593 aa23.95■■□□□ 1.42
PBX1-218ENST00000560469 TRAIPQ9BWF2 469 aa23.95■■□□□ 1.42
PBX1-218ENST00000560469 LHX5Q9H2C1 402 aa23.95■■□□□ 1.42
PBX1-218ENST00000560469 KIAA1257Q9ULG3 409 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms