RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PIK3R2O00459 728 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 CEP104O60308 925 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 CYP1A1P04798 512 aaPredicted RBP11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 TCP1P17987 556 aaKnown RBP11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 HOXD10P28358 340 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 CD52P31358 61 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 ZNF132P52740 706 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 BPIFB4P59827 614 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 NOMO3P69849 1222 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 ITGA7Q13683 1181 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 IFI16Q16666 785 aaKnown RBP11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 SERINC5Q86VE9 423 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 MCOLN2Q8IZK6 566 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 NME8Q8N427 588 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 C12orf29Q8N999 325 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 RNF169Q8NCN4 708 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 WHAMMQ8TF30 809 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 KRT35Q92764 455 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 RBM12Q9NTZ6 932 aaKnown RBP11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 CNTN6Q9UQ52 1028 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 SMIM28A0A1B0GU29 152 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 KPNA6O60684 536 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 ACLYP53396 1101 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 SLC7A5Q01650 507 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 TUBB2AQ13885 445 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 ZNF618Q5T7W0 954 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 MAP3K21Q5TCX8 1036 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 SLFN11Q7Z7L1 901 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 SPATA4Q8NEY3 305 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 HDAC7Q8WUI4 952 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 TAF4BQ92750 862 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 TUBB2BQ9BVA1 445 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 AP1M1Q9BXS5 423 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 ELOVL4Q9GZR5 314 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 TRPV6Q9H1D0 765 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 AMFRQ9UKV5 643 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 STXBP5LQ9Y2K9 1186 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 C2CD2Q9Y426 696 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 TRIM17Q9Y577 477 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 TRPV2Q9Y5S1 764 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 PTCH2Q9Y6C5 1203 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 CASP8AP2Q9UKL3 1982 aa11.59□□□□□ -0.55
SNRPA1-211ENST00000560433 COMTP21964 271 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 MAP2K2P36507 400 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 CLCN6P51797 869 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 RAD23BP54727 409 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 RBP5P82980 135 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 CYP4A22Q5TCH4 519 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 DCAF12L1Q5VU92 463 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 ALKAL1Q6UXT8 129 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 RNF180Q86T96 592 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 RHOT2Q8IXI1 618 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 WDTC1Q8N5D0 677 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 BCO2Q9BYV7 579 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 ADAM22Q9P0K1 906 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 ANAPC7Q9UJX3 599 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 THSD7BQ9C0I4 1608 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 CYP1A2P05177 515 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 PRLRP16471 622 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 NDST1P52848 882 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 TNNC1P63316 161 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 CENPCQ03188 943 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 DENND1BQ6P3S1 775 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 MON1BQ7L1V2 547 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 SLC4A11Q8NBS3 891 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 ALG3Q92685 438 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 HEXIM2Q96MH2 286 aaKnown RBP11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 MRPL45Q9BRJ2 306 aaKnown RBP11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 LRRC1Q9BTT6 524 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 SENP6Q9GZR1 1112 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 ABCB6Q9NP58 842 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 CYTH4Q9UIA0 394 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 GTF3C4Q9UKN8 822 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 ITGA11Q9UKX5 1188 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 NME7Q9Y5B8 376 aa11.58□□□□□ -0.56
SNRPA1-211ENST00000560433 SPTLC1O15269 473 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 MGEA5O60502 916 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 MLH1P40692 756 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 PAFAH1B1P43034 410 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 CKAP4Q07065 602 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 ZBTB6Q15916 424 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 KYAT1Q16773 422 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 LHX8Q68G74 356 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 RSPH3Q86UC2 560 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 ZNF677Q86XU0 584 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 SYCE1Q8N0S2 351 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 GPR161Q8N6U8 529 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 UBA3Q8TBC4 463 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 HES6Q96HZ4 224 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 CNTN3Q9P232 1028 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 PCDH10Q9P2E7 1040 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 O00370 1275 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 DDX3YO15523 660 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 FKTNO75072 461 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 CILPO75339 1184 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 AXLP30530 894 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 GRK4P32298 578 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 RPL7AP62424 266 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 VSNL1P62760 191 aa11.57□□□□□ -0.56
SNRPA1-211ENST00000560433 CFAP221Q4G0U5 840 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms