RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 C11orf74Q86VG3 221 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 GPIHBP1Q8IV16 184 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 NOSTRINQ8IVI9 506 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 ARID3BQ8IVW6 561 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-215ENST00000560424 BLIDQ8IZY5 108 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 DAGLBQ8NCG7 672 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 EXOC4Q96A65 974 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 ZFYVE19Q96K21 471 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 ZNF396Q96N95 335 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-215ENST00000560424 AIFM3Q96NN9 605 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 HHIPQ96QV1 700 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 DUSP15Q9H1R2 295 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-215ENST00000560424 C2orf40Q9H1Z8 148 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 RGL1Q9NZL6 768 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 CEP72Q9P209 647 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 NCANO14594 1321 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 CCDC194A0A1B0GVG4 234 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 H0Y626 953 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 SYN3O14994 580 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 ZBTB39O15060 712 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
SMAD3-215ENST00000560424 DTNBO60941 627 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 MOSPD3O75425 235 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 TRIM16O95361 564 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 YEATS4O95619 227 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 GCFC2P16383 781 aaKnown RBP10.15□□□□□ -0.78
SMAD3-215ENST00000560424 ARL2P36404 184 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 NASPP49321 788 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-215ENST00000560424 YARSP54577 528 aaKnown RBP10.15□□□□□ -0.78
SMAD3-215ENST00000560424 EPHB3P54753 998 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 NAB2Q15742 525 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 NPY5RQ15761 445 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 DCAF4L1Q3SXM0 396 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 SOWAHCQ53LP3 525 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-215ENST00000560424 WDR44Q5JSH3 913 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 FOXD4L5Q5VV16 416 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-215ENST00000560424 MAEAQ7L5Y9 396 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 KRT25Q7Z3Z0 450 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 PDZD3Q86UT5 571 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 PROSER1Q86XN7 944 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 SHKBP1Q8TBC3 707 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 BPIFB1Q8TDL5 484 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 FOXD4L4Q8WXT5 416 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-215ENST00000560424 NAP1L4Q99733 375 aaKnown RBP10.15□□□□□ -0.78
SMAD3-215ENST00000560424 PDZD7Q9H5P4 517 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 GOLGA2P5Q9HBQ8 144 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 AFF4Q9UHB7 1163 aaKnown RBP10.15□□□□□ -0.78
SMAD3-215ENST00000560424 FBXL5Q9UKA1 691 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 RCOR1Q9UKL0 485 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 KLK13Q9UKR3 277 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 MAFFQ9ULX9 164 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 ZZEF1O43149 2961 aa10.15□□□□□ -0.78
SMAD3-215ENST00000560424 PODXLO00592 558 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 DCLK1O15075 740 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 TRAK2O60296 914 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 CCNT1O60563 726 aaKnown RBP10.14□□□□□ -0.79
SMAD3-215ENST00000560424 RNF40O75150 1001 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 APBB3O95704 486 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 MARCKSP29966 332 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-215ENST00000560424 ALDH1A3P47895 512 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 DGKEP52429 567 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 ATXN3P54252 364 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-215ENST00000560424 EPHA5P54756 1037 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 UBE2HP62256 183 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 SIM1P81133 766 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-215ENST00000560424 TNK2Q07912 1038 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 LMAN2Q12907 356 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 FAM187BQ17R55 369 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 USP39Q53GS9 565 aaKnown RBP10.14□□□□□ -0.79
SMAD3-215ENST00000560424 RILPL1Q5EBL4 403 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 GPR158Q5T848 1215 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 PKN3Q6P5Z2 889 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 NEK8Q86SG6 692 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 DIS3L2Q8IYB7 885 aaKnown RBP10.14□□□□□ -0.79
SMAD3-215ENST00000560424 SLFN12Q8IYM2 578 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 C3orf58Q8NDZ4 430 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 APPL2Q8NEU8 664 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 TNFRSF25Q93038 417 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 RSPRY1Q96DX4 576 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 GCNAQ96QF7 691 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 NUSAP1Q9BXS6 441 aaKnown RBP10.14□□□□□ -0.79
SMAD3-215ENST00000560424 ATXN3LQ9H3M9 355 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 BRMS1Q9HCU9 246 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 KCNMB3Q9NPA1 279 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 TOPORSQ9NS56 1045 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-215ENST00000560424 ANKEF1Q9NU02 776 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 SLC38A7Q9NVC3 462 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 OBP2AQ9NY56 170 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 YIPF1Q9Y548 306 aa10.14□□□□□ -0.79
SMAD3-215ENST00000560424 ADAMTS20P59510 1910 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 M0R2N6 131 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 PRPF40AO75400 957 aaKnown RBP10.13□□□□□ -0.79
SMAD3-215ENST00000560424 FGF19O95750 216 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 KRT2P35908 639 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 MAPK8P45983 427 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 TRAPPC10P48553 1259 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 GUCY1B3Q02153 619 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 PSMD2Q13200 908 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 NBR1Q14596 966 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 COL28A1Q2UY09 1125 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms