RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 UVRAGQ9P2Y5 699 aa15□□□□□ -0.01
CARMIL3-203ENST00000560349 GOLGA6BA6NDN3 693 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 SLC15A5A6NIM6 579 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 ECHS1P30084 290 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 PSEN1P49768 467 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 MAP2K5Q13163 448 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 UBR7Q8N806 425 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 KAT2BQ92831 832 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 ACSF2Q96CM8 615 aaPredicted RBP14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 CALR3Q96L12 384 aaKnown RBP14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 EIF2AQ9BY44 585 aaKnown RBP14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 ANK1P16157 1881 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 UNCXA6NJT0 531 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 PIK3R2O00459 728 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 B4GALT4O60513 344 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 MTA2O94776 668 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 NPTXRO95502 500 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 ZNF132P52740 706 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 MORN1Q5T089 497 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 TTC27Q6P3X3 843 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 HEMGNQ9BXL5 484 aa14.99□□□□□ -0.01
CARMIL3-203ENST00000560349 MIF4GDA9UHW6 222 aaKnown RBP14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 MYO1FO00160 1098 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 PPEF2O14830 753 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 MYL3P08590 195 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 CTGFP29279 349 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 CTNNA1P35221 906 aaKnown RBP14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 PAK2Q13177 524 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 MAMLD1Q13495 774 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 SNX1Q13596 522 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 SEL1L2Q5TEA6 688 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 IQSEC1Q6DN90 963 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 ZNF677Q86XU0 584 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 PRELID2Q8N945 189 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 TMEM40Q8WWA1 233 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 DNAJB3Q8WWF6 145 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 ATG4AQ8WYN0 398 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 BCCIPQ9P287 314 aaKnown RBP eCLIP14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 TREHO43280 583 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 TAS2R40P59535 323 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 LACTBP83111 547 aaPredicted RBP14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 ATP13A4Q4VNC1 1196 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 ZNF667Q5HYK9 610 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 DENND1BQ6P3S1 775 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 SAPCD2Q86UD0 394 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 FAM81BQ96LP2 452 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 MCEEQ96PE7 176 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 RPS6KC1Q96S38 1066 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 ARHGAP39Q9C0H5 1083 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 TSPYL1Q9H0U9 437 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 SNTG2Q9NY99 539 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 AGAP1Q9UPQ3 857 aa14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 GNEQ9Y223 722 aaKnown RBP14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 TRIP12Q14669 1992 aaPredicted RBP14.98□□□□□ -0.01
CARMIL3-203ENST00000560349 GOLGA8SH3BPF8 625 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 CCDC188H7C350 402 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 TLR3O15455 904 aaKnown RBP14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 KRT14P02533 472 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 ZNF865P0CJ78 1059 aaPredicted RBP14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 CYP2C9P11712 490 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 DR1Q01658 176 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 PTP4A2Q12974 167 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 CATSPER4Q7RTX7 472 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 WDTC1Q8N5D0 677 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 GOLGA6L1Q8N7Z2 621 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 C1orf54Q8WWF1 131 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 MAGOHBQ96A72 148 aaKnown RBP14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 WNT8AQ9H1J5 351 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 CYTH4Q9UIA0 394 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 CNTN6Q9UQ52 1028 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 PCDHA3Q9Y5H8 950 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 AKAP5P24588 427 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 AP3M2P53677 418 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 POU5F1Q01860 360 aaKnown RBP14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 EMBQ6PCB8 327 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 CCDC50Q8IVM0 306 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 KIF12Q96FN5 646 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 NFKBIZQ9BYH8 718 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 RSPH14Q9UHP6 348 aa14.97□□□□□ -0.01
CARMIL3-203ENST00000560349 TRIP11Q15643 1979 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 GOLGA6L10A0A0M3HER8 536 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 MYADML2A6NDP7 307 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 PI4K2BG5E9Z4 385 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 RARAP10276 462 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 MCF2P10911 925 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 HOXA11P31270 313 aaPredicted RBP14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 RWDD2BP57060 319 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 CRHR2Q13324 411 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 TMEM132DQ14C87 1099 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 TCEAL1Q15170 157 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 DNAJC21Q5F1R6 531 aaKnown RBP14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 ZFYVE27Q5T4F4 411 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 ANKS1BQ7Z6G8 1248 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 OR2W6PQ8NHA6 318 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 ZMAT2Q96NC0 199 aaKnown RBP14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 ZIM3Q96PE6 472 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 NXF3Q9H4D5 531 aaKnown RBP14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 KLK14Q9P0G3 267 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 SNX24Q9Y343 169 aa14.96□□□□□ -0.01
CARMIL3-203ENST00000560349 A6NJR5 290 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms