RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 ACO1P21399 889 aaKnown RBP14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 KRT9P35527 623 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 BRCC3P46736 316 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 ALDH7A1P49419 539 aaKnown RBP14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 GSDMDP57764 484 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 YWHAEP62258 255 aaKnown RBP14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 ARHGAP44Q17R89 818 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 SOWAHAQ2M3V2 549 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 KCNT2Q6UVM3 1135 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 DSTYKQ6XUX3 929 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 SCARA5Q6ZMJ2 495 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 CNGA4Q8IV77 575 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 FIBCD1Q8N539 461 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 TTC39CQ8N584 583 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 TC2NQ8N9U0 490 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 COLGALT1Q8NBJ5 622 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 HASPINQ8TF76 798 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 SYN2Q92777 582 aaPredicted RBP14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 CLP1Q92989 425 aaKnown RBP14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 SUSD3Q96L08 255 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 ZNF558Q96NG5 402 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 SPAG5Q96R06 1193 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 MMS19Q96T76 1030 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 DNAJC7Q99615 494 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 SMYD3Q9H7B4 428 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 ADAM28Q9UKQ2 775 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 L1RE1Q9UN81 338 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 PRG3Q9Y2Y8 225 aaPredicted RBP14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 CEP290O15078 2479 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 GBF1Q92538 1859 aa14.61□□□□□ -0.07
HMBOX1-213ENST00000560269 LAMA2P24043 3122 aaKnown RBP14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 ARHGEF37A1IGU5 675 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 LRRC53A6NM62 1247 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 FOXN3O00409 490 aaPredicted RBP14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 CYB561D2O14569 222 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 TRAPPC3O43617 180 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 HUS1O60921 280 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 TADA2AO75478 443 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 CYP11A1P05108 521 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 WEE2P0C1S8 567 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 HNRNPH3P31942 346 aaKnown RBP14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 PBX3P40426 434 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 STAT1P42224 750 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 ADKP55263 362 aaKnown RBP14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 CDH8P55286 799 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 INCA1Q0VD86 236 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 SPOUT1Q5T280 376 aaKnown RBP14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 FMNL3Q8IVF7 1028 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 FAM71AQ8IYT1 594 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 SLC39A11Q8N1S5 342 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 TMEM86AQ8N2M4 240 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 APPL2Q8NEU8 664 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 OR8K1Q8NGG5 319 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 SPATA18Q8TC71 538 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 CISHQ9NSE2 258 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 AIPL1Q9NZN9 384 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 PCDHB8Q9UN66 801 aa14.6□□□□□ -0.07
HMBOX1-213ENST00000560269 LCHNA4D1U4 455 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 NT5C1B-RDH14C9J2C7 533 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 CILPO75339 1184 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 ODC1P11926 461 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 TYMPP19971 482 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 WARSP23381 471 aaKnown RBP14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 SOX5P35711 763 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 RAP1GAPP47736 663 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 GOLGA8FQ08AF8 430 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 GOLGA8DPQ0D2H9 430 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 ELAVL2Q12926 359 aaKnown RBP14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 CCDC186Q7Z3E2 898 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 TMEM173Q86WV6 379 aaPredicted RBP14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 PDCL2Q8N4E4 241 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 BCL7CQ8WUZ0 217 aaPredicted RBP14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 KBTBD7Q8WVZ9 684 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 IGSF21Q96ID5 467 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 PANX2Q96RD6 677 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 MRPL45Q9BRJ2 306 aaKnown RBP14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 AAASQ9NRG9 546 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 ABHD10Q9NUJ1 306 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 DSEQ9UL01 958 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 BARX2Q9UMQ3 279 aaPredicted RBP14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 PCDHA11Q9Y5I1 949 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 SF3B1O75533 1304 aaKnown RBP eCLIP14.59□□□□□ -0.072e-6■■■■■ 97.4
HMBOX1-213ENST00000560269 NLRC5Q86WI3 1866 aa14.59□□□□□ -0.07
HMBOX1-213ENST00000560269 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 GRXCR1A8MXD5 290 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 I3L4J1 428 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 GABRDO14764 452 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 SYN3O14994 580 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 PNMA6AP0CW24 399 aaPredicted RBP14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 FERP16591 822 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 CD58P19256 250 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 PPM1AP35813 382 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 ZNF132P52740 706 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 RABGGTBP53611 331 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 MEA1Q16626 185 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 SFMBT2Q5VUG0 894 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 WSCD1Q658N2 575 aa14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 E4F1Q66K89 784 aaPredicted RBP14.58□□□□□ -0.08
HMBOX1-213ENST00000560269 FAM109BQ6ICB4 259 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms