RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 FSTL4Q6MZW2 842 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 GAREM2Q75VX8 874 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 C18orf25Q96B23 403 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 TMEM209Q96SK2 561 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 SCNM1Q9BWG6 230 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 SLC38A7Q9NVC3 462 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 LHX6Q9UPM6 363 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 SLC8A2Q9UPR5 921 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 TNRC6BQ9UPQ9 1833 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 CEP192Q8TEP8 1941 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 ADAMTS9Q9P2N4 1935 aa14.03□□□□□ -0.16
RABGGTA-213ENST00000560127 LNP1A1A4G5 178 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 WNT7AO00755 349 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 DPYSL4O14531 572 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 DTNBO60941 627 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 PRAMEF12O95522 483 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 KCNE1P15382 129 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 CYP11B2P19099 503 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 RPL9P32969 192 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 YARSP54577 528 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 OSTNP61366 133 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 CREB5Q02930 508 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 NR5A1Q13285 461 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 ITPRIPL2Q3MIP1 535 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 TMEM196Q5HYL7 178 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 DAB2IPQ5VWQ8 1189 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 CPLX2Q6PUV4 134 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 PADI6Q6TGC4 694 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 RUFY3Q7L099 469 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 HAUS6Q7Z4H7 955 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 CATSPER3Q86XQ3 398 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 APPL2Q8NEU8 664 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 ZCCHC14Q8WYQ9 949 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 TNFRSF25Q93038 417 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 CHFRQ96EP1 664 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 TBC1D32Q96NH3 1257 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 PGLYRP2Q96PD5 576 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 MTMR9Q96QG7 549 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 CDT1Q9H211 546 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 POLD4Q9HCU8 107 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 TOPORSQ9NS56 1045 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 OBP2AQ9NY56 170 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 DAXXQ9UER7 740 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 TNFSF13BQ9Y275 285 aa14.02□□□□□ -0.17
RABGGTA-213ENST00000560127 BCLAF3A2AJT9 711 aaKnown RBP14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 DCLK1O15075 740 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 MEFVO15553 781 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 ATG13O75143 517 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 MED24O75448 989 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 CAVIN2O95810 425 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 OR4Q2P0C623 313 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 CEACAM1P13688 526 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 MCM4P33991 863 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 EFNA5P52803 228 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 PLCB2Q00722 1185 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 DUSP4Q13115 394 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 GPR158Q5T848 1215 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 APBB1IPQ7Z5R6 666 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 CAMKK1Q8N5S9 505 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 BPIFB1Q8TDL5 484 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 HHIPQ96QV1 700 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 CCDC94Q9BW85 323 aaPredicted RBP14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 PTPRHQ9HD43 1115 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 TUFT1Q9NNX1 390 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 PCDHB8Q9UN66 801 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 SCN1AP35498 2009 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 TSC2P49815 1807 aa14.01□□□□□ -0.17
RABGGTA-213ENST00000560127 TCHHQ07283 1943 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 STK36Q9NRP7 1315 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 OAZ2O95190 189 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 XBP1P17861 261 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 CSRP1P21291 193 aaKnown RBP14□□□□□ -0.17
RABGGTA-213ENST00000560127 WEE1P30291 646 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 EPHB3P54753 998 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 PLD1Q13393 1074 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 PPP2R5AQ15172 486 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 ELF2Q15723 593 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 DNAJB7Q7Z6W7 309 aaPredicted RBP14□□□□□ -0.17
RABGGTA-213ENST00000560127 TMEM130Q8N3G9 435 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 NACC1Q96RE7 527 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 ACO2Q99798 780 aaKnown RBP14□□□□□ -0.17
RABGGTA-213ENST00000560127 ATXN3LQ9H3M9 355 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 CNTN3Q9P232 1028 aa14□□□□□ -0.17
RABGGTA-213ENST00000560127 OTOL1A6NHN0 477 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 TAF4O00268 1085 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 CDX4O14627 284 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 TRDMT1O14717 391 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 NEMFO60524 1076 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 RNF40O75150 1001 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 RHOBTB1O94844 696 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 EGFP01133 1207 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 GABRR2P28476 465 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 SCRN1Q12765 414 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 GRSF1Q12849 480 aaKnown RBP eCLIP13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 ZNF568Q3ZCX4 644 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 CENPPQ6IPU0 288 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 PSMG2Q969U7 264 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 IFT74Q96LB3 600 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 ACAP3Q96P50 834 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms