RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 CD72P21854 359 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 SCP2P22307 547 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 LMBRD2Q68DH5 695 aaPredicted RBP19.2■□□□□ 0.66
HDDC3-205ENST00000559898 SLFN12LQ6IEE8 588 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 CD302Q8IX05 232 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 HVCN1Q96D96 273 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 PRRX2Q99811 253 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 ASB7Q9H672 318 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 ZNF334Q9HCZ1 680 aaPredicted RBP19.2■□□□□ 0.66
HDDC3-205ENST00000559898 AVENQ9NQS1 362 aaPredicted RBP19.2■□□□□ 0.66
HDDC3-205ENST00000559898 OLFML3Q9NRN5 406 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 SEL1LQ9UBV2 794 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 ZFP37Q9Y6Q3 630 aaPredicted RBP19.2■□□□□ 0.66
HDDC3-205ENST00000559898 CACNA1HO95180 2353 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 MIA3Q5JRA6 1907 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 SHISA7A6NL88 538 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 XPOTO43592 962 aaKnown RBP19.19■□□□□ 0.66
HDDC3-205ENST00000559898 PPP6R2O75170 966 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 ZSCAN22P10073 491 aaPredicted RBP19.19■□□□□ 0.66
HDDC3-205ENST00000559898 TYMPP19971 482 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 GRM2Q14416 872 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 CCDC142Q17RM4 750 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 FAM78AQ5JUQ0 283 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 STXBP5Q5T5C0 1151 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 WSCD1Q658N2 575 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 CENPPQ6IPU0 288 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 RTL10Q7L3V2 364 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 USP37Q86T82 979 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 LRRTM3Q86VH5 581 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 TMC8Q8IU68 726 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 HSCBQ8IWL3 235 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 CCDC105Q8IYK2 499 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 DTWD2Q8NBA8 298 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 CXorf38Q8TB03 319 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 NOC3LQ8WTT2 800 aaKnown RBP19.19■□□□□ 0.66
HDDC3-205ENST00000559898 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 DLGAP2Q9P1A6 1054 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 DERAQ9Y315 318 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 C2CD2Q9Y426 696 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 PTPRJQ12913 1337 aa19.19■□□□□ 0.66
HDDC3-205ENST00000559898 TICRRQ7Z2Z1 1910 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.18■□□□□ 0.66
HDDC3-205ENST00000559898 HCRTO43612 131 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 GPR17Q13304 367 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 TEAD2Q15562 447 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 MTSS1LQ765P7 747 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 BRSK2Q8IWQ3 736 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 GRAMD1CQ8IYS0 662 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 STKLD1Q8NE28 680 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 SHKBP1Q8TBC3 707 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 RSPRY1Q96DX4 576 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 ZNF396Q96N95 335 aaPredicted RBP19.18■□□□□ 0.66
HDDC3-205ENST00000559898 PYM1Q9BRP8 204 aaKnown RBP19.18■□□□□ 0.66
HDDC3-205ENST00000559898 TRIM9Q9C026 710 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 PDE11AQ9HCR9 933 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 TMLHEQ9NVH6 421 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 PCDHA7Q9UN72 937 aa19.18■□□□□ 0.66
HDDC3-205ENST00000559898 PIEZO1Q92508 2521 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 OR6C75A6NL08 312 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 CYB561D2O14569 222 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 CUTAO60888 179 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 YEATS4O95619 227 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 CYP11A1P05108 521 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 ODC1P11926 461 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 VIPR2P41587 438 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 DNM1Q05193 864 aaKnown RBP19.17■□□□□ 0.66
HDDC3-205ENST00000559898 SLC39A12Q504Y0 691 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 PDZD4Q76G19 769 aaPredicted RBP19.17■□□□□ 0.66
HDDC3-205ENST00000559898 ASCL5Q7RTU5 278 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 SYCP3Q8IZU3 236 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 C1orf127Q8N9H9 656 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 ZNF512Q96ME7 567 aaPredicted RBP19.17■□□□□ 0.66
HDDC3-205ENST00000559898 LPIN3Q9BQK8 851 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 BLZF1Q9H2G9 400 aa19.17■□□□□ 0.66
HDDC3-205ENST00000559898 ITGB3P05106 788 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 POLR2BP30876 1174 aaKnown RBP19.16■□□□□ 0.66
HDDC3-205ENST00000559898 TAF6P49848 677 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 EPHA5P54756 1037 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 TFAMQ00059 246 aaKnown RBP19.16■□□□□ 0.66
HDDC3-205ENST00000559898 ANGPT1Q15389 498 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 SLC44A4Q53GD3 710 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 FRMD5Q7Z6J6 570 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 OSTM1Q86WC4 334 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 ASB16Q96NS5 453 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 TSPAN18Q96SJ8 248 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 ZCWPW1Q9H0M4 648 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 TNMDQ9H2S6 317 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 RBAKQ9NYW8 714 aaPredicted RBP19.16■□□□□ 0.66
HDDC3-205ENST00000559898 GDE1Q9NZC3 331 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 SIX4Q9UIU6 781 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 AGAP1Q9UPQ3 857 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 ZDHHC9Q9Y397 364 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 PCDHB13Q9Y5F0 798 aa19.16■□□□□ 0.66
HDDC3-205ENST00000559898 A0A1W2PRU2 124 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 POLR2DO15514 142 aaKnown RBP19.15■□□□□ 0.66
HDDC3-205ENST00000559898 ECI2O75521 394 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 IL18RAPO95256 599 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 ATF6P18850 670 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 GARTP22102 1010 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms