RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 ACP6Q9NPH0 428 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 NOCTQ9UK39 431 aaKnown RBP13.03□□□□□ -0.32
HERC1-205ENST00000559886 ADGRG1Q9Y653 693 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 ESPNB1AK53 854 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 EFCAB14O75071 495 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 CYP11B1P15538 503 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 MSNP26038 577 aaKnown RBP13.03□□□□□ -0.32
HERC1-205ENST00000559886 INCA1Q0VD86 236 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 LIMS2Q7Z4I7 341 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 NOP9Q86U38 636 aaKnown RBP13.03□□□□□ -0.32
HERC1-205ENST00000559886 TTC39CQ8N584 583 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 ADAMTS1Q9UHI8 967 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 ZNF263O14978 683 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 DDHD2O94830 711 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 IGFBP6P24592 240 aaPredicted RBP13.02□□□□□ -0.32
HERC1-205ENST00000559886 PDE6CP51160 858 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 BMS1Q14692 1282 aaKnown RBP13.02□□□□□ -0.32
HERC1-205ENST00000559886 SLC18A3Q16572 532 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 SOWAHAQ2M3V2 549 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 VPS36Q86VN1 386 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 ZNF280BQ86YH2 543 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 C7orf61Q8IZ16 206 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 C3orf58Q8NDZ4 430 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 SLC20A1Q8WUM9 679 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 DDX1Q92499 740 aaKnown RBP13.02□□□□□ -0.32
HERC1-205ENST00000559886 AGPAT1Q99943 283 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 PPP2R2CQ9Y2T4 447 aa13.02□□□□□ -0.32
HERC1-205ENST00000559886 REXO2Q9Y3B8 237 aaKnown RBP13.02□□□□□ -0.32
HERC1-205ENST00000559886 PTPRSQ13332 1948 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 A0A087X0T9 212 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 B4GALT3O60512 393 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 CILPO75339 1184 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 BAIAP3O94812 1187 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 CCDC175P0C221 793 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 FAM228BP0C875 321 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 ACRP10323 421 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 AARSP49588 968 aaKnown RBP eCLIP13.02□□□□□ -0.33
HERC1-205ENST00000559886 GATMP50440 423 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 GFPT1Q06210 699 aaPredicted RBP13.02□□□□□ -0.33
HERC1-205ENST00000559886 PPIGQ13427 754 aaKnown RBP eCLIP13.02□□□□□ -0.33
HERC1-205ENST00000559886 DPH6Q7L8W6 267 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 COLGALT2Q8IYK4 626 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 CCAR2Q8N163 923 aaKnown RBP13.02□□□□□ -0.33
HERC1-205ENST00000559886 C17orf53Q8N3J3 647 aaPredicted RBP13.02□□□□□ -0.33
HERC1-205ENST00000559886 ACRBPQ8NEB7 543 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 SLC30A5Q8TAD4 765 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 WHAMMQ8TF30 809 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 ABHD8Q96I13 439 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.02□□□□□ -0.33
HERC1-205ENST00000559886 HTATIP2Q9BUP3 242 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.33
HERC1-205ENST00000559886 BARX2Q9UMQ3 279 aaPredicted RBP13.02□□□□□ -0.33
HERC1-205ENST00000559886 DDX3XO00571 662 aaKnown RBP eCLIP13.01□□□□□ -0.334e-9■□□□□ 9.5
HERC1-205ENST00000559886 TACC1O75410 805 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 IPO7O95373 1038 aaKnown RBP13.01□□□□□ -0.33
HERC1-205ENST00000559886 CHRNB2P17787 502 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 PAX3P23760 479 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 CDR2Q01850 454 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 RNASELQ05823 741 aaKnown RBP13.01□□□□□ -0.33
HERC1-205ENST00000559886 COL13A1Q5TAT6 717 aaPredicted RBP13.01□□□□□ -0.33
HERC1-205ENST00000559886 DCLRE1AQ6PJP8 1040 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 C16orf59Q7L2K0 433 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 ZNF677Q86XU0 584 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 TOP6BLQ8N6T0 577 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 RABGGTAQ92696 567 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 BADQ92934 168 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 TOP1MTQ969P6 601 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 ZSCAN12O43309 604 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 HUS1O60921 280 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 B3GAT3O94766 335 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 AMHP03971 560 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 FAM163BP0C2L3 166 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 TNFAIP3P21580 790 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 GNA15P30679 374 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 RAD23BP54727 409 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 WDR5P61964 334 aaKnown RBP13.01□□□□□ -0.33
HERC1-205ENST00000559886 KRT83P78385 493 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 CYP27A1Q02318 531 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 FPGSQ05932 587 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 SPA17Q15506 151 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 ZNF394Q53GI3 561 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 CD300LGQ6UXG3 332 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 APPL2Q8NEU8 664 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 LNX1Q8TBB1 728 aaPredicted RBP13.01□□□□□ -0.33
HERC1-205ENST00000559886 FAM193BQ96PV7 902 aaPredicted RBP13.01□□□□□ -0.33
HERC1-205ENST00000559886 MRPL45Q9BRJ2 306 aaKnown RBP13.01□□□□□ -0.33
HERC1-205ENST00000559886 MRPL9Q9BYD2 267 aaKnown RBP13.01□□□□□ -0.33
HERC1-205ENST00000559886 NENFQ9UMX5 172 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 L1RE1Q9UN81 338 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 COL4A6Q14031 1691 aa13.01□□□□□ -0.33
HERC1-205ENST00000559886 CYB561D2O14569 222 aa13□□□□□ -0.33
HERC1-205ENST00000559886 DGKIO75912 1065 aa13□□□□□ -0.33
HERC1-205ENST00000559886 UPP2O95045 317 aa13□□□□□ -0.33
HERC1-205ENST00000559886 CALCAP01258 141 aa13□□□□□ -0.33
HERC1-205ENST00000559886 PAEPP09466 180 aa13□□□□□ -0.33
HERC1-205ENST00000559886 KBTBD7Q8WVZ9 684 aa13□□□□□ -0.33
HERC1-205ENST00000559886 SENP8Q96LD8 212 aa13□□□□□ -0.33
HERC1-205ENST00000559886 TWNKQ96RR1 684 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms