RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 P3H1Q32P28 736 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 HP1BP3Q5SSJ5 553 aaPredicted RBP10.65□□□□□ -0.7
LRRC28-216ENST00000559819 MFSD7Q6UXD7 560 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 TRIM72Q6ZMU5 477 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 SYDE1Q6ZW31 735 aaPredicted RBP10.65□□□□□ -0.7
LRRC28-216ENST00000559819 TAOK1Q7L7X3 1001 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 ARMC9Q7Z3E5 817 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 CROCCP2Q86T23 111 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 TRIM50Q86XT4 487 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 UBR7Q8N806 425 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 GDAP1Q8TB36 358 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 PRPF31Q8WWY3 499 aaKnown RBP10.65□□□□□ -0.7
LRRC28-216ENST00000559819 TCHPQ9BT92 498 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 STMN4Q9H169 189 aaPredicted RBP10.65□□□□□ -0.7
LRRC28-216ENST00000559819 BTBD7Q9P203 1132 aa10.65□□□□□ -0.7
LRRC28-216ENST00000559819 CCT8L1PA6NM43 557 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 F8VP50 259 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 ADCY3O60266 1144 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 SRGAP2CP0DJJ0 459 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 KLRC2P26717 231 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 MAN1A1P33908 653 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 ZNF132P52740 706 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 C1QBPQ07021 282 aaKnown RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 NFX1Q12986 1120 aaKnown RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 TARBP2Q15633 366 aaKnown RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 CYP4A22Q5TCH4 519 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 CYP4F22Q6NT55 531 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 CDR2LQ86X02 465 aaPredicted RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 LRRC71Q8N4P6 559 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 EXD1Q8NHP7 514 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 DYDC1Q8WWB3 177 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 ZBTB10Q96DT7 871 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 NIFKQ9BYG3 293 aaKnown RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 ACTR5Q9H9F9 607 aaPredicted RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 PARVAQ9NVD7 372 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 HOXC10Q9NYD6 342 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 DNPEPQ9ULA0 475 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 CNTN6Q9UQ52 1028 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 SCINQ9Y6U3 715 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 IVNS1ABPQ9Y6Y0 642 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 MYH9P35579 1960 aaKnown RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 IGKV6D-21A0A0A0MT36 114 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 SOWAHBA6NEL2 793 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 TCP11X1B4DZS4 312 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 ASAP2O43150 1006 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 RASSF9O75901 435 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 WEE2P0C1S8 567 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 MMP8P22894 467 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 TBXAS1P24557 533 aaPredicted RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 TCF7P36402 384 aaPredicted RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 OSTNP61366 133 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 LY6KQ17RY6 165 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 BRSK2Q8IWQ3 736 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 SUGP1Q8IWZ8 645 aaKnown RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 SERPINB12Q96P63 405 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 SLITRK1Q96PX8 696 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 TMEM191CA6NGB0 347 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 FZD9O00144 591 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 LIASO43766 372 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 FAM189A1O60320 539 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 ASS1P00966 412 aaKnown RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 TMEM191BP0C7N4 346 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 ABCD1P33897 745 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 STAT5BP51692 787 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 LACTB2Q53H82 288 aaPredicted RBP10.64□□□□□ -0.71
LRRC28-216ENST00000559819 CAPN12Q6ZSI9 719 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 TFAP2BQ92481 460 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 VCPIP1Q96JH7 1222 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 CCDC134Q9H6E4 229 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 TMEM134Q9H6X4 195 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 CD248Q9HCU0 757 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 CISHQ9NSE2 258 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 ABCF3Q9NUQ8 709 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 FGFR1OP2Q9NVK5 253 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 SAMD15Q9P1V8 674 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 TJP2Q9UDY2 1190 aa10.64□□□□□ -0.71
LRRC28-216ENST00000559819 MSCO60682 206 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 GJB1P08034 283 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 RAP1GAPP47736 663 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 MNAT1P51948 309 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 HIRAP54198 1017 aaPredicted RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 ORC1Q13415 861 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 PLCB4Q15147 1175 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 GPAT2Q6NUI2 795 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 HIBCHQ6NVY1 386 aaPredicted RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 DNAJC24Q6P3W2 148 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 NCAPG2Q86XI2 1143 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 APOBEC3FQ8IUX4 373 aaKnown RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 WDTC1Q8N5D0 677 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 C10orf88Q9H8K7 445 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 HOMER3Q9NSC5 361 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 KLC4Q9NSK0 619 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 NRBP2Q9NSY0 501 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 IP6K2Q9UHH9 426 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 NAALADL1Q9UQQ1 740 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 SIP14410 1827 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 ARIH2O95376 493 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms